Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I09
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 620 AAFSNTDXKPSSLSGRTTTIRKPYSEYGNS 531
           A F NT+  P +   R     KP +E GN+
Sbjct: 16  AVFGNTNLDPPTRPARLRREAKPEAEPGNN 45


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 488 RYLILKIKSSKHG*SNCRTRSMVSVWWSS 574
           RY IL  + S+H  +N     +V  W++S
Sbjct: 399 RYEILNFRKSEHNGTNGYQYQVVGKWFNS 427


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 488 RYLILKIKSSKHG*SNCRTRSMVSVWWSS 574
           RY IL  + S+H  +N     +V  W++S
Sbjct: 489 RYEILNFRKSEHNGTNGYQYQVVGKWFNS 517


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -2

Query: 620 AAFSNTDXKPSSLSGRTTTIRKPYSEYGNS 531
           A F NT+  P +   R     KP +E GN+
Sbjct: 15  AVFGNTNLDPPTRPTRLRREAKPEAEPGNN 44


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -1

Query: 459 YDSFGVHVEIFVNCLGSVERHTPMTLEEYNIEKCDSCVW 343
           Y SFG  +        +V    P  ++EYN    D+  W
Sbjct: 346 YSSFGKILATEPTLFSNVTPKFPRNIDEYNNNDLDTKKW 384


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 541  YSEYGFRMVVVLPDKLDGLXSVLEKA 618
            YS+YG R +   P K  G  ++   A
Sbjct: 1027 YSKYGLRFLRAKPGKSSGAAAMASAA 1052


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 623 SAAFSNTDXKPSSLSGRTTTI 561
           S AFS T    +SL G+T  +
Sbjct: 925 SPAFSGTSSPTNSLVGKTVAV 945


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.133    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,742
Number of Sequences: 438
Number of extensions: 4490
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)