Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I08
         (615 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   5.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.6  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   9.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.6  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 132 ASCEAVAGVPSVYSAASSN 76
           ++ E V GVPS+Y   + N
Sbjct: 34  SNVEVVVGVPSIYLTYAKN 52


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 60  PWRKYYLMRRRSTPTVRQRPLRNWL 134
           P+ +YY+ R        ++P  NWL
Sbjct: 141 PYDEYYVWRDARIVNGTRQPPNNWL 165


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 65  PWKWHHQGNTGC 30
           P KW H+   GC
Sbjct: 490 PGKWPHEDKRGC 501


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 575 LQRNIITYYKSRP 537
           L  +I TY+KSRP
Sbjct: 51  LMTHIYTYHKSRP 63


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 65  PWKWHHQGNTGC 30
           P KW H+   GC
Sbjct: 580 PGKWPHEDKRGC 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,682
Number of Sequences: 438
Number of extensions: 3842
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)