Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I05
         (441 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   236   3e-62
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       236   3e-62
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       236   3e-62
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   236   3e-62
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...   138   6e-33
U52144-1|AAC50455.1|  419|Homo sapiens isocitrate dehydrogenase ...    42   0.001
BC110597-1|AAI10598.1|  411|Homo sapiens ligand-gated ion channe...    29   9.4  
AF512521-1|AAO20969.1|  411|Homo sapiens ligand-gated ion channe...    29   9.4  
AB223030-1|BAE19924.1|  411|Homo sapiens ligand-gated ion-channe...    29   9.4  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  236 bits (577), Expect = 3e-62
 Identities = 110/139 (79%), Positives = 124/139 (89%), Gaps = 5/139 (3%)
 Frame = +1

Query: 7   QTEKAFQKQATVFLNRKGGM-----KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTG 171
           QTE+A+QKQ T+F N+K  +     K K  R+ KN+GLGFKTP+EA+EGTYIDKKCPFTG
Sbjct: 5   QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64

Query: 172 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 351
           NVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGD
Sbjct: 65  NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124

Query: 352 IVTIGECRPLSKTVRFNVL 408
           IVT+GECRPLSKTVRFNVL
Sbjct: 125 IVTVGECRPLSKTVRFNVL 143


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score =  138 bits (335), Expect = 6e-33
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = +1

Query: 205 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 384
           VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60

Query: 385 KTVRFNVL 408
           KTVRFNVL
Sbjct: 61  KTVRFNVL 68


>U52144-1|AAC50455.1|  419|Homo sapiens isocitrate dehydrogenase
           protein.
          Length = 419

 Score = 41.9 bits (94), Expect = 0.001
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = -1

Query: 414 DLQYIEPDCLGKRPALANCDDVSDFHV 334
           DL+++E  CL +RPALA+CDDV+D  V
Sbjct: 18  DLEHVEAHCLAQRPALAHCDDVTDLDV 44


>BC110597-1|AAI10598.1|  411|Homo sapiens ligand-gated ion channel,
           zinc activated 1 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 333 PEARR*MNRHVPVSLLKSVVFRQVMEII---APDNNCSLHFHFLNNACQDTASDGHVTRE 163
           P+AR   + HV ++L  +       E++      +NCSL F+ L+N   +     HV  E
Sbjct: 134 PQARVDQDGHVKLNLALTTETNCNFELLHFPRDHSNCSLSFYALSNTAMELEFQAHVVNE 193


>AF512521-1|AAO20969.1|  411|Homo sapiens ligand-gated ion channel
           subunit protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 333 PEARR*MNRHVPVSLLKSVVFRQVMEII---APDNNCSLHFHFLNNACQDTASDGHVTRE 163
           P+AR   + HV ++L  +       E++      +NCSL F+ L+N   +     HV  E
Sbjct: 134 PQARVDQDGHVKLNLALTTETNCNFELLHFPRDHSNCSLSFYALSNTAMELEFQAHVVNE 193


>AB223030-1|BAE19924.1|  411|Homo sapiens ligand-gated ion-channel
           receptor L2 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 333 PEARR*MNRHVPVSLLKSVVFRQVMEII---APDNNCSLHFHFLNNACQDTASDGHVTRE 163
           P+AR   + HV ++L  +       E++      +NCSL F+ L+N   +     HV  E
Sbjct: 134 PQARVDQDGHVKLNLALATETNCNFELLHFPRDHSNCSLSFYALSNTAMELEFQAHVVNE 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,494,645
Number of Sequences: 237096
Number of extensions: 1488273
Number of successful extensions: 6764
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6755
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)