Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_I04
         (497 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.62 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.1  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       24   3.3  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   5.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   5.8  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   5.8  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   5.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.6  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       23   7.6  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       23   7.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -2

Query: 325  F*LEEPFHYEA*RVIVESIIAVQYNSIFYTVLDYFRDYHFCYLDSTYNMETGDK 164
            F  ++ F+YE+ +   +S+  + Y+     V  Y + +H  +  +TY  +T D+
Sbjct: 1787 FPTQDGFYYESEQYPDQSVYVLVYDKRKLKVASYVKTHHGDHHLTTYMYDTNDR 1840


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -2

Query: 325  F*LEEPFHYEA*RVIVESIIAVQYNSIFYTVLDYFRDYHFCYLDSTYNMETGDK 164
            F  ++ F+YE+ +    S+  + Y+     V  Y + +H  +  +TY  +T D+
Sbjct: 1788 FPTQDGFYYESEQYPRRSVYVLVYDKRKLKVASYVKTHHGDHHLTTYMYDTNDR 1841


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 TKMVVPEIIQYGVEDAVILDCDYTFNNDT 289
           +K   P+I++Y  +D +  D D  F++D+
Sbjct: 80  SKKTNPQIVEYEFDDDLPFDDDSDFDDDS 108


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 238 TVLDYFRDYHFCYLDSTYNMETGDKQKD 155
           T+ +   +YH CY+    ++   D+ KD
Sbjct: 98  TITEQKGNYHECYMPQVIHVSREDQLKD 125


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 238 TVLDYFRDYHFCYLDSTYNMETGDKQKD 155
           T+ +   +YH CY+    ++   D+ KD
Sbjct: 98  TITEQKGNYHECYMPQVIHVSREDQLKD 125


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 238 TVLDYFRDYHFCYLDSTYNMETGDKQKD 155
           T+ +   +YH CY+    ++   D+ KD
Sbjct: 98  TITEQKGNYHECYMPQVIHVSREDQLKD 125


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 238 TVLDYFRDYHFCYLDSTYNMETGDKQKD 155
           T+ +   +YH CY+    ++   D+ KD
Sbjct: 98  TITEQKGNYHECYMPQVIHVSREDQLKD 125


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 TKMVVPEIIQYGVEDAVILDCDYTFNND 286
           +K   P+I++Y  +D    D D  F++D
Sbjct: 310 SKKTNPQIVEYEFDDDFPFDDDSDFDDD 337


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 TKMVVPEIIQYGVEDAVILDCDYTFNND 286
           +K   P+I++Y  +D    D D  F++D
Sbjct: 80  SKKTNPQIVEYEFDDDFPFDDDSDFDDD 107


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 203 TKMVVPEIIQYGVEDAVILDCDYTFNND 286
           +K   P+I++Y  +D    D D  F++D
Sbjct: 80  SKKTNPQIVEYEFDDDFPFDDDSDFDDD 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,723
Number of Sequences: 2352
Number of extensions: 10957
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)