Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H23
(608 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 218 4e-57
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 218 4e-57
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 215 3e-56
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 212 4e-55
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 56 4e-08
Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein. 31 0.93
AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p pro... 31 0.93
AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolo... 31 0.93
AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA ... 31 0.93
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 6.6
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 6.6
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 6.6
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 6.6
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 6.6
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 6.6
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 6.6
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 218 bits (533), Expect = 4e-57
Identities = 99/130 (76%), Positives = 114/130 (87%)
Frame = +2
Query: 218 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 397
A K Q+K++KG G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 398 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDIHVAKVNTLIRPDGKKKAYVRL 577
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 578 ARDYDALDVA 607
ARDYDALD+A
Sbjct: 254 ARDYDALDIA 263
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 218 bits (533), Expect = 4e-57
Identities = 99/130 (76%), Positives = 114/130 (87%)
Frame = +2
Query: 218 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 397
A K Q+K++KG G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 398 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDIHVAKVNTLIRPDGKKKAYVRL 577
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 578 ARDYDALDVA 607
ARDYDALD+A
Sbjct: 262 ARDYDALDIA 271
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 215 bits (526), Expect = 3e-56
Identities = 98/130 (75%), Positives = 112/130 (86%)
Frame = +2
Query: 218 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 397
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 398 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDIHVAKVNTLIRPDGKKKAYVRL 577
LT+EAAMKKIEDNNTLVF+ H +NK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 578 ARDYDALDVA 607
ARDYDALD+A
Sbjct: 262 ARDYDALDIA 271
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 212 bits (517), Expect = 4e-55
Identities = 98/130 (75%), Positives = 113/130 (86%)
Frame = +2
Query: 218 ALKAQRKVVKGEHGNRVRKIRTSVHFRRPKTFEPPRQPKYPRKSLPKRNRMDAYNIIKYP 397
A K Q+K++K G R RKIRT+VHFRRP T + PR PKYPRKS+P RNRMDAYNIIKYP
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 398 LTSEAAMKKIEDNNTLVFIVHTSSNKHHIKAAVKKLYDIHVAKVNTLIRPDGKKKAYVRL 577
LT+EAAMKKIEDNNTLVF+ H +NK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 578 ARDYDALDVA 607
ARDYDALD+A
Sbjct: 254 ARDYDALDIA 263
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 56.0 bits (129), Expect = 4e-08
Identities = 36/111 (32%), Positives = 52/111 (46%)
Frame = +1
Query: 274 DSHFSAFPKTQNF*ASKATKVS*KVTTQTESHGCL*HHQIPTHFGSCHEKD*G*QYPGIH 453
D H A P + A++ ++V ++ E HG + HHQ+PT HE+D G Q+PG+
Sbjct: 143 DPHQRALPSANHPEAAQESQVPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLP 202
Query: 454 CSY*FQQTSHQGCSKETL*HSCC*S*HTYKA*WQEEGVRKASKRLRRIRCC 606
+ QQ S + L H + A W EEG+ RLRR C
Sbjct: 203 HTPARQQEPRACRSAQALRHQGGQGERAHPARWPEEGLCAPGARLRRPGHC 253
>Y10229-1|CAA71278.1| 784|Drosophila melanogaster RAD54 protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -3
Query: 450 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 271
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 270 RTLLPCSPLTTF 235
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>AY069599-1|AAL39744.2| 788|Drosophila melanogaster LD35220p
protein.
Length = 788
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -3
Query: 450 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 271
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 60 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 116
Query: 270 RTLLPCSPLTTF 235
+ C+ L F
Sbjct: 117 HDPMACNALVLF 128
>AF069779-1|AAC24577.1| 784|Drosophila melanogaster Rad54 homolog
OKR protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -3
Query: 450 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 271
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 270 RTLLPCSPLTTF 235
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>AE014134-530|AAF51168.1| 784|Drosophila melanogaster CG3736-PA
protein.
Length = 784
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = -3
Query: 450 NTRVLLSSIFFMAASEVSGYLMML*ASMRFRLGSDFLGYFGCLGGSKVLGLRKCTEVRIL 271
NT L I F A SE + + A +F++ D Y GG +VLG+R+C R L
Sbjct: 56 NTSELPLPIRFTANSEYELAIAKVLAR-KFKVPMD--NYVPDYGGKRVLGVRRCISRRPL 112
Query: 270 RTLLPCSPLTTF 235
+ C+ L F
Sbjct: 113 HDPMACNALVLF 124
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1450 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 338 PRKSLPKRNRM-DAYNIIKYPLTSEAAMKKIED 433
P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1446 PFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,268,317
Number of Sequences: 53049
Number of extensions: 462741
Number of successful extensions: 1203
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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