Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_H22
         (662 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49073-1|CAA88886.1|  206|Caenorhabditis elegans Hypothetical pr...    31   0.55 
Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z49967-9|CAA90256.1|  328|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF022985-6|AAB69963.1|  457|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U58757-1|AAD47117.2|  620|Caenorhabditis elegans Dicer related h...    28   5.1  
AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z22179-4|CAA80161.1|  410|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U80455-10|AAB37887.2|  395|Caenorhabditis elegans Activated in b...    28   6.8  
Z81553-12|CAB04498.3|  803|Caenorhabditis elegans Hypothetical p...    27   9.0  
Z81553-7|CAB04496.4|  797|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z81492-9|CAB04026.2|  805|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF100306-5|AAC68924.2|  318|Caenorhabditis elegans Hypothetical ...    27   9.0  

>Z49073-1|CAA88886.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK970.2 protein.
          Length = 206

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
 Frame = +1

Query: 91  SESDGEREHELSSRSSTGS*VVMMN--ERAVASALCTAVPTVSNLNVTKTTGLHIGPKFV 264
           +E  GER +++ SR      V +M   +  +ASAL   +  + + +  K   ++I     
Sbjct: 17  NEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMYINSPGG 76

Query: 265 SVTQNVHNNEVVKDLPLPRYLWKVAKNSSRAERLSCA 375
           SVT  +   + ++ +  P   W + + SS    L CA
Sbjct: 77  SVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCA 113


>Z68760-4|CAE17822.1|  160|Caenorhabditis elegans Hypothetical
           protein F36H1.9 protein.
          Length = 160

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -1

Query: 572 CCTMTSRSGSK--RVVLSVLLAFSASHMFLLMFHSWGAISM 456
           CCT+     ++    +L +L+ FS    + + FH+W A+++
Sbjct: 10  CCTLFCHVNTRIALTILDILIGFSNILSYAIQFHNWSALTL 50


>Z49967-9|CAA90256.1|  328|Caenorhabditis elegans Hypothetical
           protein F54C9.11 protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 266 PSLRMCTTTKWSKICPYHVICG 331
           PS+R+C  T  S+ CPY V  G
Sbjct: 275 PSVRICALTNASRFCPYRVRTG 296


>U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical
           protein F02C9.2 protein.
          Length = 806

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   L++P + V ++ T + R
Sbjct: 268 LSVGTYSPWNSQNTMFHKSAFHTLFLP-TTVSFRTTDIWR 306


>AF022985-6|AAB69963.1|  457|Caenorhabditis elegans Hypothetical
           protein T15B7.7 protein.
          Length = 457

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   L++P + V ++ T + R
Sbjct: 37  LSVGTYSPWNSQNTMFHKSAFHTLFLP-TTVSFRTTDIWR 75


>AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical
           protein Y45G12C.11 protein.
          Length = 779

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   L++P + V ++ T + R
Sbjct: 245 LSVGTYSPWNSQNTMFHKSAFHTLFLP-TTVSFRTTDIWR 283


>AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical
           protein F56A4.6 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   L++P + V ++ T + R
Sbjct: 262 LSVGTYSPWNSQNTMFHKSAFHTLFLP-TTVSFRTTDIWR 300


>Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical
           protein Y69H2.1 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +1

Query: 226 TKTTGLHIGPKFVSVTQNVHNNEVVKDLPLPRYLWKVAKNSSRAERLSCAAALVALITCV 405
           T T  L +   FV + Q+V   E +   PL    WKV     R+    CA   +   +C+
Sbjct: 238 TSTKHLSLNYSFVILLQSV--TEFILSFPLTMRQWKVLLAGIRSVNYFCAYGYMFSFSCI 295

Query: 406 GLI 414
            ++
Sbjct: 296 FMV 298


>U58757-1|AAD47117.2|  620|Caenorhabditis elegans Dicer related
           helicase protein 2 protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 487 SRNMWLAEKANNTDRTTRF-DPLRLVIVQHTVCQECDRFIICAAELRTLQTYFL 645
           S  +W   +  +TD+  R  + +   IV   VC +CD  +    ++R+  T ++
Sbjct: 441 SNKVWPRIQREDTDKAQRIKEQINRNIVYKIVCMKCDTVLCTNKDIRSKNTQYI 494


>AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical
           protein ZK105.3 protein.
          Length = 802

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   L++P + V ++ T + R
Sbjct: 257 LSVGTYSPWNSQNTLFHKSAFHTLFLP-TTVSFRTTDIWR 295


>Z22179-4|CAA80161.1|  410|Caenorhabditis elegans Hypothetical
           protein F58A4.4 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 535 TRFDPLRLVIVQHTVCQECDRFIICAAELRTLQ 633
           T +DP+R      TVC +C +F++ A ++   Q
Sbjct: 110 TDYDPVRNCCKDATVCPKCWKFMVLAVKILDFQ 142


>U80455-10|AAB37887.2|  395|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 11 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +3

Query: 279 CAQQRSGQRFAPTTLSVESGEEFKQS*KIIVCRCSCSINHMCRSHC 416
           CAQQ   Q+ APT  S        Q   I  C+ SCS    C+S C
Sbjct: 72  CAQQYQQQQCAPTCQSSCEQSCVAQQQPIAQCQSSCS--STCQSAC 115


>Z81553-12|CAB04498.3|  803|Caenorhabditis elegans Hypothetical
           protein F56H6.9 protein.
          Length = 803

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   +++P + V ++ T + R
Sbjct: 265 LSVGTYSPWNSQNTLFHKSAFHTMFLP-TTVSFRTTDIWR 303


>Z81553-7|CAB04496.4|  797|Caenorhabditis elegans Hypothetical
           protein F56H6.7 protein.
          Length = 797

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   +++P + V ++ T + R
Sbjct: 265 LSVGTYSPWNSQNTLFHKSAFHTMFLP-TTVSFRTTDIWR 303


>Z81492-9|CAB04026.2|  805|Caenorhabditis elegans Hypothetical
           protein E03H4.4 protein.
          Length = 805

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 533 LRVSTHCDWSSCNTPXVKSAIDLLYVPLSCVHYKLTSLER 652
           L V T+  W+S NT   KSA   +++P + V ++ T + R
Sbjct: 269 LSVGTYSPWNSQNTLFHKSAFHTMFLP-TTVSFRTTDIWR 307


>AF100306-5|AAC68924.2|  318|Caenorhabditis elegans Hypothetical
           protein T24C4.5 protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 535 TRFDPLRLVIVQHTVCQECDRFIICAAELRTLQ 633
           T +DP+R      TVC +C +F++ A  +   Q
Sbjct: 110 TDYDPVRNCCKDATVCPKCWKFMVLAVRILDFQ 142


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,840
Number of Sequences: 27780
Number of extensions: 318712
Number of successful extensions: 1007
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)