BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H16
(694 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 180 1e-45
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 180 1e-45
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 142 4e-34
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P... 33 0.28
BT003194-1|AAO24949.1| 371|Drosophila melanogaster RE59468p pro... 31 1.5
AF199369-2|AAF09580.1| 318|Drosophila melanogaster MEI-P22 prot... 29 6.0
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 180 bits (439), Expect = 1e-45
Identities = 96/194 (49%), Positives = 118/194 (60%), Gaps = 1/194 (0%)
Frame = +1
Query: 103 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 282
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 283 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 462
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 463 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQ 642
TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKT 198
Query: 643 GE-DIFAYKKEKYV 681
GE DIFA KKE++V
Sbjct: 199 GEADIFAAKKERFV 212
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 180 bits (439), Expect = 1e-45
Identities = 96/194 (49%), Positives = 118/194 (60%), Gaps = 1/194 (0%)
Frame = +1
Query: 103 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 282
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 283 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 462
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 463 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQ 642
TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKT 198
Query: 643 GE-DIFAYKKEKYV 681
GE DIFA KKE++V
Sbjct: 199 GEADIFAAKKERFV 212
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 142 bits (344), Expect = 4e-34
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 1/194 (0%)
Frame = +1
Query: 103 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 282
N L G+LR+SK++MY ++A+Y+ + VV++ V +K
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63
Query: 283 SRKSFYPTQDKIRGRSHGKSFSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXX 462
K+ YPT+ ++ R +FS+H R TR NLTPGTV ILLAGRH GKR
Sbjct: 64 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123
Query: 463 XXFTGPFAFNACPLRRIPQRYVIGTSTKVDLGDFKLPAHLDDAYFXXXXXXXXXXXXXXQ 642
TGPFA N+CPLRR+ QRYVIGTS+KVDLG FK+P HL+DAYF
Sbjct: 124 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYF----RRLKAKKDKKT 179
Query: 643 GE-DIFAYKKEKYV 681
GE DIFA KKE++V
Sbjct: 180 GEADIFAAKKERFV 193
>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
isoform B protein.
Length = 1346
Score = 33.5 bits (73), Expect = 0.28
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 71 VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 247
+S S AN+ I S T S SP+AG L I SL +R+ + + P +SK V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163
Query: 248 KRMEALVQSC*KAGNHSTPLRTRS 319
+E +++ K +P + S
Sbjct: 1164 VHLETPLRNGRKRVLRRSPSNSNS 1187
>BT003194-1|AAO24949.1| 371|Drosophila melanogaster RE59468p
protein.
Length = 371
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 450 QHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAMRTTPDLVLS 304
+H NEH + + R+ N++ + +VRS P +F TPD LS
Sbjct: 323 RHVNEHQGVLPFTKRKYNSYTS-LQVRSTPMPIFNHPNGFANTPDAFLS 370
>AF199369-2|AAF09580.1| 318|Drosophila melanogaster MEI-P22 protein
protein.
Length = 318
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = -3
Query: 521 RCGILRRGHALKAKGPVK------SSRPLGNTPTSTTRLPACLPANRMHTVP 384
+C +RG K K P K S+ LGNTP S ++LPA PA+ +H +P
Sbjct: 149 QCTPKKRGR--KPKQPAKKLQSRISTDQLGNTP-SPSKLPAKYPAHFVHQLP 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,493,633
Number of Sequences: 53049
Number of extensions: 630929
Number of successful extensions: 1453
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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