Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_H15
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.64 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   0.85 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.85 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 509  ENSGLSPIDALSEVKARQVTENNPNLGIDCMGHDSNDLKALNVIR 643
            E SG++ ++A + V  +++T     LG+  +GH    + ++  +R
Sbjct: 944  ERSGVTTLEAAARVTVQELTA----LGVTLVGHQKKIMNSVTALR 984


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 378 YTTRLSCTRLRTIQSASWTDLFASSTIMRLPPRIKSVTAREFEHCS 241
           +T  LS  +LRT+ +  +  LF  + +      I S+    F +CS
Sbjct: 386 HTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIASIDPLAFRNCS 431


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 627 AFRSLESCPIQSMPRFGLFSVTCRAFTSESASIG 526
           +F+ L S    S PR+  F++   +FT +S   G
Sbjct: 220 SFQRLTSSTFASDPRYTTFTINGESFTLQSGIFG 253


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 432 SAALATAREHEISAAPPPYTTRLSCTRLRTI 340
           +A L + R  + +  PPP  T     R+R +
Sbjct: 369 NAMLLSGRSQKSTTGPPPGPTPAQKARMRAL 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,368
Number of Sequences: 438
Number of extensions: 4651
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)