Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H11
(594 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 33 0.23
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 32 0.30
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 32 0.40
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 32 0.40
03_06_0672 + 35443883-35444051,35444151-35444482 29 2.8
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 29 2.8
04_03_0881 + 20528257-20528760,20528837-20529283 29 3.7
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 28 4.9
11_01_0411 - 3114959-3115000,3115504-3116703 28 6.5
07_03_1201 + 24791588-24792619 28 6.5
07_03_0504 - 18842442-18844668,18845418-18845428 28 6.5
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 6.5
02_01_0150 + 1063732-1064214,1064290-1064355,1064721-1064803,106... 28 6.5
01_01_0280 + 2295043-2295154,2295258-2295475,2295558-2296970 28 6.5
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 27 8.5
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437... 27 8.5
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Frame = +3
Query: 24 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHY--------NVARGVQKILQDYKSLQD 179
L + +A+ +P+V+ L S S+ HY ++ +++LQ L +
Sbjct: 441 LDKKLAQRKHFPSVNWLISYSKYSKIPTALEPHYEREDPDFIDIRTKAREVLQREDDLNE 500
Query: 180 IIAILGMDELSEEDKLTVARARKIQR-FLSQ 269
I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 501 IVQLVGKDALAESDKITLETAKLLREDYLAQ 531
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 144 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 269
+++LQ L +I+ ++G D L+E DK+T+ A+ ++ +L+Q
Sbjct: 500 REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQ 542
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 24 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 191
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 396 IDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAV 455
Query: 192 LGMDELSEEDKLTVARARKIQR-FLSQ 269
+G + LS ED L + K +R F++Q
Sbjct: 456 VGEEALSSEDLLYLEFLDKFERKFVTQ 482
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 24 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 191
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 366 IDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAV 425
Query: 192 LGMDELSEEDKLTVARARKIQR-FLSQ 269
+G + LS ED L + K +R F++Q
Sbjct: 426 VGEEALSSEDLLYLEFLDKFERKFVTQ 452
>03_06_0672 + 35443883-35444051,35444151-35444482
Length = 166
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 129 VARGVQKILQDYKSLQDIIAILGMDELSEEDK 224
VA GVQ++++ KSL I A+ +E EE++
Sbjct: 84 VATGVQRLIKGIKSLSQIFAMYDDEEEDEEER 115
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 70 PLTPLPVSWTPT*LVPSTTMLHVAFR 147
PL+P+P S PT L+P + L AFR
Sbjct: 43 PLSPVPASVPPTALIPGSRFLVDAFR 68
>04_03_0881 + 20528257-20528760,20528837-20529283
Length = 316
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 162 SPAEFSERHVQHCSARHQLCWGP*YGKW 79
+P S HC RHQLC+ P W
Sbjct: 23 TPTSPSSSSSPHCHGRHQLCYPPAPSSW 50
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 304 ACPVNTSATWKGWERNLWILRARATVSLSSSDNSSI 197
A P+ +S TWKG E L +++ R + + DN I
Sbjct: 42 AFPLVSSPTWKGIEHGLELVKQRIIWRVGNGDNIKI 77
>11_01_0411 - 3114959-3115000,3115504-3116703
Length = 413
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 67 IPLTPLPVSWTPT*LVPSTTMLHV 138
+P P P W P+ VPS+ LHV
Sbjct: 276 VPCPPAPPLWLPSPSVPSSLALHV 299
>07_03_1201 + 24791588-24792619
Length = 343
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +3
Query: 168 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL--EETIKG 341
S D + +L ++L D R + RF+ +PF AE G +V L E +K
Sbjct: 227 SRPDRVLLLRYEDLLR-DGAAGEHVRAMARFMGRPFSAAEEAAGAVASVVELCSFERMKA 285
Query: 342 FS---KILQGEYDHLPEVAFYMVG 404
+ G Y +P AF+ G
Sbjct: 286 LEVNRRGTAGSYKSMPRDAFFRKG 309
>07_03_0504 - 18842442-18844668,18845418-18845428
Length = 745
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 168 SLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVP 320
S +++++++ MD+ S +TV K+ FL A H+G +P
Sbjct: 310 SARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDIP 360
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 304 ACPVNTSATWKGWERNLWILR 242
A P NTS TWKG E L +L+
Sbjct: 440 AFPSNTSPTWKGIEHGLELLK 460
>02_01_0150 +
1063732-1064214,1064290-1064355,1064721-1064803,
1065100-1065155,1065247-1066061
Length = 500
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +3
Query: 144 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL 323
+K+L+ ++Q+ ++ ++ E + A + + R LS F+ ++ AG LVP+
Sbjct: 181 KKMLKHRYAMQEAKHLVCDKNVTVEQSIHTALSSQFVR-LSSYFK--KIHMSGAGNLVPM 237
Query: 324 EETIKGFSKILQGE 365
E +K SKI GE
Sbjct: 238 EIALKVASKIAAGE 251
>01_01_0280 + 2295043-2295154,2295258-2295475,2295558-2296970
Length = 580
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 419 DFFNRSNHIKCYFWKVVVLSL*NFG 345
D NR H+ +FW + VLSL NFG
Sbjct: 529 DNLNRG-HLDYFFWLLAVLSLINFG 552
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 111 GAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAR 245
G +HY + ++K LQD K+ +I G++ LSEE+ R R
Sbjct: 406 GTDHY-LRFMLRKKLQDIKNDDKMIQAEGVESLSEEELRQACRER 449
>01_06_0705 + 31342236-31342415,31343086-31343391,31343555-31343796,
31343927-31344122,31344419-31344602,31344984-31345147,
31345454-31345981,31346530-31346630,31347619-31347634,
31347834-31347941,31348028-31348078,31349059-31349100,
31349442-31349541,31350039-31350256,31350367-31350807,
31350916-31351043,31351131-31351992
Length = 1288
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 428 LCNDFFNRSNHIKCYFWKVVVLSL*NFGESFNSFLQWHK 312
L + NR NH+ +FW + VLS NF ++ + W+K
Sbjct: 1237 LAGNNINR-NHLDLFFWLLAVLSFLNF-LNYLFWASWYK 1273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,821,318
Number of Sequences: 37544
Number of extensions: 362922
Number of successful extensions: 1038
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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