Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_H11
         (594 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...   256   7e-69
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    32   0.27 
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    31   0.47 
L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical pr...    31   0.82 
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr...    30   1.1  
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll...    30   1.1  
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    30   1.1  
J05067-1|AAB59179.1|  313|Caenorhabditis elegans clb-2 protein.        30   1.1  
U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U58756-9|AAC48086.1|  667|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical...    27   7.6  
AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical...    27   7.6  
AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical...    27   7.6  
AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conduct...    27   7.6  
AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conduct...    27   7.6  
AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conduct...    27   7.6  
AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical ...    27   7.6  

>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score =  256 bits (628), Expect = 7e-69
 Identities = 123/148 (83%), Positives = 134/148 (90%)
 Frame = +3

Query: 3   HLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDI 182
           HLDATTVLSR IAEL IYPAVDPLDSTSRIMDPN++G  HY++ARGVQKILQDYKSLQDI
Sbjct: 387 HLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQDYKSLQDI 446

Query: 183 IAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILQG 362
           IAILGMDELSEEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+GF+ IL+G
Sbjct: 447 IAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRGFTMILKG 506

Query: 363 EYDHLPEVAFYMVGPIEEVIAKADTLAK 446
           E DHLPEVAFYM G I++V  KA+ LAK
Sbjct: 507 ELDHLPEVAFYMQGGIDDVFKKAEELAK 534


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 20/76 (26%), Positives = 41/76 (53%)
 Frame = +3

Query: 144 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPL 323
           ++ILQ+ + L +I+ ++G   L+E DK+T+    ++ + +   F     +T +  +  P 
Sbjct: 469 KEILQEEEDLSEIVQLVGKASLAESDKVTL----EVAKIIKDDFLQQNGYTKY-DRFCPF 523

Query: 324 EETIKGFSKILQGEYD 371
            +T+ G  K + G YD
Sbjct: 524 YKTV-GMLKNMIGFYD 538


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 31.5 bits (68), Expect = 0.47
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
 Frame = +3

Query: 51  IYPAVDPLDSTSRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEE 218
           IYP +D L S SR+M       +   +H +++  +       K +Q + A++G++ LS +
Sbjct: 380 IYPPIDVLPSLSRLMKSAVGEGMTREDHSDLSNQLYACYAMGKDVQAMKAVVGVEALSPD 439

Query: 219 DKLTVARARKIQR-FLSQ 269
           D L +    K ++ F++Q
Sbjct: 440 DLLYLEFLAKFEKNFIAQ 457


>L16621-7|ABA00181.1|  300|Caenorhabditis elegans Hypothetical
           protein ZK688.10 protein.
          Length = 300

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 164 VVLQNFLNATCNIVVLGTNYVGVHDTGSGVKGI 66
           + + N +  +  IVV+G N  GVHD G  V GI
Sbjct: 160 IKVTNIIILSQTIVVIGANLFGVHDFGDSVFGI 192


>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
            K04H4.1b protein.
          Length = 1502

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 421  MTSSIGPTI*NATSGRWSYSPCRILENP---LIVSSSGTSLPACPVNTSATWKGW 266
            MT  + P     T+ R   S C + E P   + V S  TS+P CP   S  W G+
Sbjct: 1362 MTPMMNPV--TGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGY 1414


>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
            K04H4.1a protein.
          Length = 1759

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 421  MTSSIGPTI*NATSGRWSYSPCRILENP---LIVSSSGTSLPACPVNTSATWKGW 266
            MT  + P     T+ R   S C + E P   + V S  TS+P CP   S  W G+
Sbjct: 1619 MTPMMNPV--TGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGY 1671


>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
            protein.
          Length = 1758

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 421  MTSSIGPTI*NATSGRWSYSPCRILENP---LIVSSSGTSLPACPVNTSATWKGW 266
            MT  + P     T+ R   S C + E P   + V S  TS+P CP   S  W G+
Sbjct: 1618 MTPMMNPV--TGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGY 1670


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
 Frame = +3

Query: 51  IYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEE 218
           IYP ++ L S SR+M   I       +H +V+  +       K +Q + A++G + LS +
Sbjct: 368 IYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSD 427

Query: 219 DKLTVARARKIQR-FLSQ 269
           D L +    K ++ F++Q
Sbjct: 428 DLLYLEFLTKFEKNFITQ 445


>J05067-1|AAB59179.1|  313|Caenorhabditis elegans clb-2 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 421 MTSSIGPTI*NATSGRWSYSPCRILENP---LIVSSSGTSLPACPVNTSATWKGW 266
           MT  + P     T+ R   S C + E P   + V S  TS+P CP   S  W G+
Sbjct: 173 MTPMMNPV--TGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSGMWTGY 225


>U23513-1|ABD94110.1|  294|Caenorhabditis elegans Hypothetical
           protein D2021.4a protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +3

Query: 84  SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 260
           ++I D N+I + HYN V+ G  + L D K ++ +  +   D   E  K+ +A  +   +F
Sbjct: 56  NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114

Query: 261 LSQ-PF 275
           L + PF
Sbjct: 115 LRKIPF 120


>U58756-9|AAC48086.1|  667|Caenorhabditis elegans Hypothetical
           protein F58F9.7 protein.
          Length = 667

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 98  VHDTGSGVKGIHSWVNTQFSNSTRQHCGG 12
           VH   SG K + +W+  +     R+ CGG
Sbjct: 382 VHALSSGAKPVATWLGVESLGEARKACGG 410


>Z50797-5|CAA90675.1|  342|Caenorhabditis elegans Hypothetical
           protein T22H6.4 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 6   LDATTVLSRAIAELGIYPAVDPLDSTSRIMD 98
           +D     ++  A LGIYPA+DP+ +   I D
Sbjct: 275 IDVGVAANKTAAFLGIYPALDPMIAIFLIKD 305


>AL021497-16|CAD27618.1| 1131|Caenorhabditis elegans Hypothetical
            protein Y51A2D.19c protein.
          Length = 1131

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1069 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1114


>AL021497-15|CAD27617.1| 1118|Caenorhabditis elegans Hypothetical
            protein Y51A2D.19b protein.
          Length = 1118

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1056 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1101


>AL021497-14|CAB54459.2| 1140|Caenorhabditis elegans Hypothetical
            protein Y51A2D.19a protein.
          Length = 1140

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1078 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1123


>AF431893-1|AAL28104.1| 1131|Caenorhabditis elegans large-conductance
            calcium-activatedpotassium channel SLO-1c protein.
          Length = 1131

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1069 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1114


>AF431892-1|AAL28103.1| 1118|Caenorhabditis elegans large-conductance
            calcium-activatedpotassium channel SLO-1b protein.
          Length = 1118

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1056 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1101


>AF431891-1|AAL28102.1| 1140|Caenorhabditis elegans large-conductance
            calcium-activatedpotassium channel SLO-1a protein.
          Length = 1140

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 245  ACTSYGQLVFFRQLIHTQNSNDILKRFVVLQNFLNATCNIVVLGTNYVGV 96
            A   YGQL      +H Q++ D +KR+V+     N    + +  T+YV V
Sbjct: 1078 ALRRYGQLCIGLYRLHDQDNPDSMKRYVI----TNPPAELRIKNTDYVYV 1123


>AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical
           protein ZK250.7 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 303 AGKLVPLEETIKGFSKILQGEYDH 374
           +GK   L+ T K  S+IL+GEY +
Sbjct: 144 SGKSFVLKHTFKNLSRILEGEYQY 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,171,317
Number of Sequences: 27780
Number of extensions: 308079
Number of successful extensions: 827
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)