Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H11
(594 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 24 1.3
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 3.0
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 3.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 3.0
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 23 3.0
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 22 5.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.9
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 82 LPVSWTPT*LVPSTTMLHVAFRKFCRTTNLFKISLLFWVWMS 207
+PV WT P +AFRKF ++++ + ++ W MS
Sbjct: 800 IPVRWT----APEA----IAFRKFTSASDVWSMGIVCWEVMS 833
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 166 NLFKISLLFWVWMSCLKKTS 225
NL KIS LF +W S K +
Sbjct: 304 NLVKISPLFTIWGSLFAKAN 323
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 3.0
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = +1
Query: 22 CCLVLLLNWVFTQLWIPLTPLP 87
CC++++++WV W+ + +P
Sbjct: 252 CCMLVIVSWV--SFWLDQSAVP 271
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 3.0
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = +1
Query: 22 CCLVLLLNWVFTQLWIPLTPLP 87
CC++++++WV W+ + +P
Sbjct: 252 CCMLVIVSWV--SFWLDQSAVP 271
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 22.6 bits (46), Expect = 3.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 166 NLFKISLLFWVWMSCLKKTS 225
NL KIS LF +W S K +
Sbjct: 54 NLVKISPLFTIWGSLFAKAN 73
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -1
Query: 108 LCWGP*YGKWSQGDPQLGKY 49
+ WG GK+ G+ ++G Y
Sbjct: 369 ISWGAECGKYPNGNTKVGSY 388
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 295 IKMLFLQWLPCLLRMSRP 312
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 363 IKMLFLQWLPCLLRMSRP 380
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 178 ISLLFWVWMSCLKKTS*P 231
I +LF W+ CL + S P
Sbjct: 363 IKMLFLQWLPCLLRMSRP 380
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,766
Number of Sequences: 438
Number of extensions: 3656
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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