Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_H07
         (464 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    30   0.71 
Z68108-1|CAA92134.1|  194|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 0.71
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 338 HPDLDSDT-VAYLWTAPNDITGEVKFRASIIQSFVIFWVGIE 460
           H +L S T V  +W AP   +G V FRAS+I++  I++   E
Sbjct: 125 HANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAE 166


>Z68108-1|CAA92134.1|  194|Caenorhabditis elegans Hypothetical
           protein T05A10.2 protein.
          Length = 194

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 173 LELNYQASLWLCLG*WCMVVV 111
           L +N  ++ W+ +G WC+VV+
Sbjct: 158 LNINIGSAFWMAVGAWCLVVI 178


>Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical
           protein ZC504.1 protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 339 WCPL*VTVLPCSPQSASCPTGSF 271
           +CP  +  L C P  ++CP G F
Sbjct: 422 FCPYAIRHLQCHPSGSTCPMGYF 444


>AL032660-2|CAA21751.1|  690|Caenorhabditis elegans Hypothetical
           protein Y70G10A.3 protein.
          Length = 690

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 316 VALFAAVCKLSHWVVRIDGPLADDLVPLT 230
           +AL + +C L HW+V I  P  +DL   T
Sbjct: 125 MALGSLICALPHWMVDIYHPDVNDLTNQT 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,695,046
Number of Sequences: 27780
Number of extensions: 230292
Number of successful extensions: 759
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)