Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_H05
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   5.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   5.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.1  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   9.1  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 231  NPEATFTIIIRKAEGIGPKTFARIVDLTKMRTLSV 127
            +P  T TII  +    GP T  R+ DL +  TL V
Sbjct: 962  DPSDTVTIITAEEAPSGPPTSIRVDDLDQ-HTLKV 995


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 178 GTYAFRLPDDYGEGGF 225
           G Y F+L D Y   GF
Sbjct: 438 GMYVFQLLDSYAVSGF 453


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 178 GTYAFRLPDDYGEGGF 225
           G Y F+L D Y   GF
Sbjct: 491 GMYVFQLLDSYAVSGF 506


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 221  ASGFLTKILTRPETKLVT*KQRTLAVCPS 307
            ++ F +K++TRP+T       + +AV P+
Sbjct: 1136 STSFDSKVMTRPDTDSENWTPKMMAVEPT 1164


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 236 TKILTRPETKLV 271
           T ++TRP+TK +
Sbjct: 146 TAVITRPDTKFI 157


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 236 TKILTRPETKLV 271
           T ++TRP+TK +
Sbjct: 146 TAVITRPDTKFI 157


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 381 PTLNFFSIFL 410
           P  NFFSIFL
Sbjct: 414 PKTNFFSIFL 423


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 1   DSEISGVPPIHADKGGEAGPYTKVQGL 81
           D  + G+ P+H   G   GP    +G+
Sbjct: 56  DIVLGGLFPVHEKGGASCGPNVYNRGV 82


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 412 FKNIEKKFKVG 380
           FKN E KFK+G
Sbjct: 58  FKNTEIKFKLG 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,570
Number of Sequences: 438
Number of extensions: 3448
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)