Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H01
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 235 2e-62
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 232 1e-61
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 51 9e-07
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 50 1e-06
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 32 0.32
11_01_0617 - 4939108-4939259,4939584-4940259 32 0.43
11_06_0092 + 19973364-19975983,19976272-19976648 31 0.56
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 30 1.7
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 29 3.0
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 29 3.0
05_06_0213 + 26414613-26414695,26416907-26417077,26417983-264182... 28 5.2
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 28 5.2
02_04_0098 + 19701999-19702185,19703698-19704551,19704732-197048... 28 5.2
05_05_0248 + 23598461-23598652,23599600-23599744,23599816-235999... 27 9.2
05_05_0221 - 23385626-23386702 27 9.2
03_01_0112 + 902459-902770,903275-903280 27 9.2
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 235 bits (576), Expect = 2e-62
Identities = 116/192 (60%), Positives = 143/192 (74%), Gaps = 5/192 (2%)
Frame = +3
Query: 39 MANKGGLKTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 218
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 219 DMATIQVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQ 383
D ATIQVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I +
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSG 120
Query: 384 SIYIPKGVNVPALAREVDWEFNPLHVKVGSHITGGDLYGIVHENTLVKHRMLVPPRAKGT 563
+YIP+GV+VPAL ++ W F P + VG ITGGDLY IV+ENTL++H++ +PP A G
Sbjct: 121 DVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGK 180
Query: 564 VTYIAPAGNYKV 599
++YIAPAG Y +
Sbjct: 181 ISYIAPAGQYSL 192
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 232 bits (568), Expect = 1e-61
Identities = 111/170 (65%), Positives = 133/170 (78%)
Frame = +3
Query: 90 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVG 269
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD ATIQVYEET+G+ V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 270 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWEFN 449
DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+GV+VPAL ++ W+F
Sbjct: 116 DPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFE 175
Query: 450 PLHVKVGSHITGGDLYGIVHENTLVKHRMLVPPRAKGTVTYIAPAGNYKV 599
P + VG ITGGDLY V ENTL+KH + +PP + G ++YIAPAG Y +
Sbjct: 176 PKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQYSL 225
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +3
Query: 102 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 269
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 64 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 123
Query: 270 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 395
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 124 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +3
Query: 102 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 269
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 24 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 83
Query: 270 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 395
V TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 84 TTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 135 EKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVE 308
EKMS + EL+ +GYN+L G I M + + + ++ +G + G LS++
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQ 526
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 57 LKTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATI 233
L +A EE+EER G F V+ + +A+++ VR+G LVG ++ + +A +
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLARL 174
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 192 VGEIIRLEGDMAT--IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 359
VG GD+ + I V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 877 VGNTASTHGDIYSYGILVLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 29.9 bits (64), Expect = 1.7
Identities = 29/118 (24%), Positives = 49/118 (41%)
Frame = +3
Query: 249 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGVNVPALAR 428
+ +TVGD V+ G + L LGS++ ++ L D+ + Q + G+ A+
Sbjct: 555 SGALTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQLLEEKPGIKDEPHAQ 614
Query: 429 EVDWEFNPLHVKVGSHITGGDLYGIVHENTLVKHRMLVPPRAKGTVTYIAPAGNYKVT 602
PL K G +G V E ++K P K +V + +G+ K T
Sbjct: 615 -------PLQFKGGRIEFENVHFGYVPERKILKGATFTVPAGK-SVAIVGTSGSGKST 664
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 29.1 bits (62), Expect = 3.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 102 HNRTSPHSLHWRSSSNRPC 46
H + H++HW S+ N PC
Sbjct: 341 HKEVAKHTIHWMSNHNSPC 359
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 36 KMANKGGLKTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 206
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>05_06_0213 +
26414613-26414695,26416907-26417077,26417983-26418219,
26418543-26418572,26419248-26419282,26421680-26421747,
26423067-26423126,26423310-26423399,26423487-26423695,
26424083-26424383
Length = 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 346 IPSKMEPRIPGPSSTDSGLPVRSTGSPTVTPDVSSYT*MV 227
+PS +P + P S L + S+GSPT+ P Y M+
Sbjct: 133 MPSAAQPPVVDPLRAHSRLSLPSSGSPTMPPWPCIYNVMI 172
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 45 NKGGLKTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 155
N GG +T E+ EE+ V V GP++ K SG A
Sbjct: 619 NDGGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>02_04_0098 +
19701999-19702185,19703698-19704551,19704732-19704890,
19705290-19705537,19705837-19705927,19706066-19706251
Length = 574
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 309 LGPGILGSIFDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWEFNPL 455
L G ++ GI RP +IN Q+I PK + P L V +NP+
Sbjct: 126 LPDGTPAILYTGIDRP--NINYQVQNIAFPKNASDPLLREWVKPAYNPV 172
>05_05_0248 +
23598461-23598652,23599600-23599744,23599816-23599966,
23600049-23600174,23600253-23600333,23600706-23600898,
23600990-23601260,23601807-23602000,23602086-23602105,
23602352-23602394
Length = 471
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 185 IVPYTDQLVHSRSGHLLRRYDGTRYSKYITEPLLILFIGDRLQTALVRHFEL 30
I+ D V HLL R + + E LL+ G+ LQ VR+F+L
Sbjct: 251 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEGENLQILDVRNFQL 302
>05_05_0221 - 23385626-23386702
Length = 358
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -3
Query: 340 SKMEP--RIPGPSSTDSGLPVRSTGSPTVTPDV 248
SK EP PGPS+ S V S SP + PD+
Sbjct: 292 SKEEPVDSCPGPSAVSSPADVVSCSSPAMEPDL 324
>03_01_0112 + 902459-902770,903275-903280
Length = 105
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 376 SSLMSFRGRWIPSKMEPRIPGPSSTDSGLPVRST 275
++L+ W+ +EP P P T+ G PV +T
Sbjct: 27 TALLGSLAGWMSRAVEPPAPRPCGTEGGPPVTAT 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,976,473
Number of Sequences: 37544
Number of extensions: 478199
Number of successful extensions: 1446
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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