Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_H01
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.79
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 24 1.0
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 24 1.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 3.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.2
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 5.6
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 7.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 7.4
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.8
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 21 9.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 9.8
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 24.6 bits (51), Expect = 0.79
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 336 FDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWE 443
+DG Q L+ I+E+ + GV++ V+W+
Sbjct: 172 YDGFQVDLRHIDEIRGKNVVDIGVDLSEFYTSVEWD 207
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 24.2 bits (50), Expect = 1.0
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 460 TWRGLNSQSTSLARAGTFTPLGM*MD*VSSLMSFRGRWIPSKMEPRIPG 314
TW L++ + S++ G +PL M D +SL++ G + PS P PG
Sbjct: 28 TWLSLDNSNMSMSSVGPQSPLDMKPD-TASLIN-PGNFSPS--GPNSPG 72
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 24.2 bits (50), Expect = 1.0
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 460 TWRGLNSQSTSLARAGTFTPLGM*MD*VSSLMSFRGRWIPSKMEPRIPG 314
TW L++ + S++ G +PL M D +SL++ G + PS P PG
Sbjct: 28 TWLSLDNSNMSMSSVGPQSPLDMKPD-TASLIN-PGNFSPS--GPNSPG 72
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.8 bits (49), Expect = 1.4
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 324 LGS-IFDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWE 443
LGS +DG + L+ ++E + S + GV++ V+W+
Sbjct: 171 LGSWTYDGFKVDLRHMDEKSGSNVVDVGVDLSEFYMSVEWD 211
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 336 FDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWE 443
+DG + L+ ++E + S + GV++ V+W+
Sbjct: 176 YDGFKVDLRHMDEKSGSNVVDVGVDLSEFYMSVEWD 211
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = -3
Query: 127 TTGPDTANT*PNLSSFSSLAI-----VFKPPLFAILNYLFYL 17
TTGP T + +L I VF P LFA+LN +++
Sbjct: 381 TTGPPPGPTPAQKARMRALNIDRVSRVFFPFLFAVLNVTYWI 422
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 3.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 99 YVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATI 233
Y+F G V A YE+ R +L+ EI+ E D T+
Sbjct: 407 YLFLAVGIVGGACSDVEQNFYEVARNKKKDLLKEILERENDSGTL 451
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 336 FDGIQRPLKDINELTQSIYIPKGVNVPALAREVDWE 443
++G Q LK + + S + KG+++ V+W+
Sbjct: 181 YNGAQVDLKHMKQEAGSNLVAKGIDLSDFYLSVEWD 216
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = -3
Query: 487 PPVICEPTLTWRG-LNS 440
PP I P LTW G +NS
Sbjct: 336 PPDILMPALTWLGWINS 352
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 7.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 407 HTLGNVDGLSQL 372
HT+GN DGL+ +
Sbjct: 237 HTVGNCDGLTSV 248
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 315 PGILGSIFDGIQRPLKDINELTQSIY 392
PGILG IF + L S+Y
Sbjct: 338 PGILGGIFGALMAALATEASYDYSLY 363
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 123 RDQIQQIHNRTSPHSLH 73
R +++Q+ N+T H LH
Sbjct: 122 RRRLEQLTNQTGLHGLH 138
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 548 GRHQHPVFNQSVFVDNTIEVPAGD 477
GRH+ + N+ + NT+E P +
Sbjct: 52 GRHEKRLLNELLSSYNTLERPVAN 75
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 548 GRHQHPVFNQSVFVDNTIEVPAGD 477
GRH+ + N+ + NT+E P +
Sbjct: 52 GRHEKRLLNELLSSYNTLERPVAN 75
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 154 ADPDIFSAVTTGPDTANT*PNLSS 83
A+P A TT P TA+ +LS+
Sbjct: 22 ANPGTIQACTTSPATASLESSLSA 45
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 322 IPGPSSTDSGLPVRST 275
+P P D +PVR T
Sbjct: 446 VPSPDPLDLAIPVRET 461
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -1
Query: 441 PNRPLWRERARSHPWECR 388
P++ + A HPW C+
Sbjct: 155 PSKRITASEALKHPWICQ 172
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,077
Number of Sequences: 438
Number of extensions: 4854
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -