Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G22
         (465 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y15924-1|CAA75882.1|  367|Homo sapiens cystinosin protein.             69   8e-12
CR542058-1|CAG46855.1|  367|Homo sapiens CTNS protein.                 69   8e-12
AJ222967-1|CAA11021.1|  367|Homo sapiens cystinosin protein.           69   8e-12
AF168787-2|AAF43102.1|  367|Homo sapiens CTNS protein.                 69   8e-12
AF112442-1|AAD45630.1|  140|Homo sapiens nephropathic cystinosis...    69   8e-12
BC032850-1|AAH32850.1|  400|Homo sapiens cystinosis, nephropathi...    68   1e-11

>Y15924-1|CAA75882.1|  367|Homo sapiens cystinosin protein.
          Length = 367

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKEFVMVN 177
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+   +  +N
Sbjct: 309 GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGYDQLN 367


>CR542058-1|CAG46855.1|  367|Homo sapiens CTNS protein.
          Length = 367

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKEFVMVN 177
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+   +  +N
Sbjct: 309 GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGYDQLN 367


>AJ222967-1|CAA11021.1|  367|Homo sapiens cystinosin protein.
          Length = 367

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKEFVMVN 177
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+   +  +N
Sbjct: 309 GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGYDQLN 367


>AF168787-2|AAF43102.1|  367|Homo sapiens CTNS protein.
          Length = 367

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKEFVMVN 177
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+   +  +N
Sbjct: 309 GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGYDQLN 367


>AF112442-1|AAD45630.1|  140|Homo sapiens nephropathic cystinosis
           protein.
          Length = 140

 Score = 68.9 bits (161), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 39/59 (66%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKEFVMVN 177
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+   +  +N
Sbjct: 82  GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRKRPGYDQLN 140


>BC032850-1|AAH32850.1|  400|Homo sapiens cystinosis, nephropathic
           protein.
          Length = 400

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +1

Query: 1   GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYRE 153
           G  S+ QM L +YN + W   FGD TKFGLG+FS+VFD+ F +QH+  YR+
Sbjct: 309 GSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLYRK 359


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,976,921
Number of Sequences: 237096
Number of extensions: 1166908
Number of successful extensions: 2463
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2463
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)