BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_G22
(465 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119096-1|AAM50956.1| 397|Drosophila melanogaster LP12305p pro... 94 1e-19
AE014297-3262|AAF56088.2| 397|Drosophila melanogaster CG17119-P... 94 1e-19
AE014297-3263|AAO41592.1| 363|Drosophila melanogaster CG17119-P... 91 7e-19
AY051651-1|AAK93075.1| 1469|Drosophila melanogaster LD02061p pro... 28 7.1
AF457205-1|AAL91368.1| 1464|Drosophila melanogaster legless prot... 28 7.1
AE014135-77|AAF59345.2| 1469|Drosophila melanogaster CG2041-PA p... 28 7.1
>AY119096-1|AAM50956.1| 397|Drosophila melanogaster LP12305p
protein.
Length = 397
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +1
Query: 1 GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKE 162
G LS+ QM LNA+NY+DWVS FGD TKFGLGLFS++FD+FF+LQHYVFYR +E
Sbjct: 314 GTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRE 367
>AE014297-3262|AAF56088.2| 397|Drosophila melanogaster CG17119-PA,
isoform A protein.
Length = 397
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +1
Query: 1 GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYREGKE 162
G LS+ QM LNA+NY+DWVS FGD TKFGLGLFS++FD+FF+LQHYVFYR +E
Sbjct: 314 GTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRE 367
>AE014297-3263|AAO41592.1| 363|Drosophila melanogaster CG17119-PB,
isoform B protein.
Length = 363
Score = 91.1 bits (216), Expect = 7e-19
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +1
Query: 1 GFLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFDIFFILQHYVFYR 150
G LS+ QM LNA+NY+DWVS FGD TKFGLGLFS++FD+FF+LQHYVFYR
Sbjct: 314 GTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYR 363
>AY051651-1|AAK93075.1| 1469|Drosophila melanogaster LD02061p protein.
Length = 1469
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 338 NSLVTLQLKYDPSSELDHALTSRLYFFSAFQLSTNKKYSRPSPLLVISEPSSLL 177
+S++T L +PS+ L H F N K RPSP S +SL+
Sbjct: 864 SSVLTHNLSSNPSTPLSHLSPKEFESFGQSSAGDNMKSRRPSPQGQRSPVNSLI 917
>AF457205-1|AAL91368.1| 1464|Drosophila melanogaster legless protein.
Length = 1464
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 338 NSLVTLQLKYDPSSELDHALTSRLYFFSAFQLSTNKKYSRPSPLLVISEPSSLL 177
+S++T L +PS+ L H F N K RPSP S +SL+
Sbjct: 859 SSVLTHNLSSNPSTPLSHLSPKEFESFGQSSAGDNMKSRRPSPQGQRSPVNSLI 912
>AE014135-77|AAF59345.2| 1469|Drosophila melanogaster CG2041-PA
protein.
Length = 1469
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 338 NSLVTLQLKYDPSSELDHALTSRLYFFSAFQLSTNKKYSRPSPLLVISEPSSLL 177
+S++T L +PS+ L H F N K RPSP S +SL+
Sbjct: 864 SSVLTHNLSSNPSTPLSHLSPKEFESFGQSSAGDNMKSRRPSPQGQRSPVNSLI 917
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,434,081
Number of Sequences: 53049
Number of extensions: 352036
Number of successful extensions: 991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -