Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G22
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           27   0.13 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.5  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   8.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   8.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   8.6  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 55  VSFFGDATKFGLGLFSLVFDIFFILQHYVFY 147
           +++  D  ++GL ++    D  F +QH+ FY
Sbjct: 324 IAYVSDVFRYGLLIYDFFKDSSFRIQHHFFY 354


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 260 RNTTWTLRRDQVQKTG 307
           +  TWT+ RD + +TG
Sbjct: 490 KQNTWTVFRDAITQTG 505


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +1

Query: 4   FLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFD 114
           ++S      N YN   W  +  D   FG  L   ++D
Sbjct: 621 YVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYD 657


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +1

Query: 4   FLSVFQMTLNAYNYNDWVSFFGDATKFGLGLFSLVFD 114
           ++S      N YN   W  +  D   FG  L   ++D
Sbjct: 621 YVSPVSSEYNQYNSRIWGGYKFDKRSFGFPLDKPLYD 657


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 226 IPAPHHCSSYP 194
           +P P HC ++P
Sbjct: 346 VPVPIHCGNFP 356


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 319 CNVTSEFSWL 348
           CN T  FSW+
Sbjct: 364 CNATGAFSWI 373


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 55  VSFFGDATKFGLGLFSLVFDIFFILQHYVFYREG 156
           +SFF D        F+ + D  F++   V +R G
Sbjct: 110 ISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTG 143


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 55  VSFFGDATKFGLGLFSLVFDIFFILQHYVFYREG 156
           +SFF D        F+ + D  F++   V +R G
Sbjct: 110 ISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTG 143


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 55  VSFFGDATKFGLGLFSLVFDIFFILQHYVFYREG 156
           +SFF D        F+ + D  F++   V +R G
Sbjct: 110 ISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTG 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,574
Number of Sequences: 438
Number of extensions: 2211
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)