Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G21
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    25   0.54 
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    25   0.54 
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    25   0.54 
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    25   0.54 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.72 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.72 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    25   0.72 
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    24   0.95 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    24   0.95 
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   1.7  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   1.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.9  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   3.8  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   3.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   5.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   5.1  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    21   6.7  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   6.7  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   6.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.9  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 417 KLQTNNKNHNKEIYYYI 367
           K   NN N+NK++YY I
Sbjct: 96  KYNYNNNNYNKKLYYNI 112


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 417 KLQTNNKNHNKEIYYYI 367
           K   NN N+NK++YY I
Sbjct: 96  KYNYNNNNYNKKLYYNI 112


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 417 KLQTNNKNHNKEIYYYI 367
           K   NN N+NK++YY I
Sbjct: 96  KYNYNNNNYNKKLYYNI 112


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 417 KLQTNNKNHNKEIYYYI 367
           K   NN N+NK++YY I
Sbjct: 96  KYNYNNNNYNKKLYYNI 112


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 405 NNKNHNKEIYYYIFS 361
           NN N+NK++YY I +
Sbjct: 104 NNNNYNKKLYYNIIN 118


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 405 NNKNHNKEIYYYIFS 361
           NN N+NK++YY I +
Sbjct: 104 NNNNYNKKLYYNIIN 118


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 420 SKLQTNNKNHNKEIYY 373
           +K   NN N+NK++YY
Sbjct: 102 NKYNYNNNNYNKKLYY 117


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 405 NNKNHNKEIYYYI 367
           NN N+NK++YY I
Sbjct: 98  NNNNYNKKLYYNI 110


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 405 NNKNHNKEIYYYI 367
           NN N+NK++YY I
Sbjct: 336 NNNNYNKKLYYNI 348


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = -3

Query: 426 IFSKLQTN---NKNHNKEIYYYIFS 361
           I S L  N   N N+NK++YY I +
Sbjct: 314 IISSLSNNTIHNNNYNKKLYYNIIN 338


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 405 NNKNHNKEIYYYIFS 361
           N KN+NK++YY I +
Sbjct: 328 NYKNYNKKLYYNIIN 342


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 554 LSGLPGESAGCGSFFIYFDKC 492
           + G+  ES      + YFDKC
Sbjct: 448 MPGVKFESVNIDKLYTYFDKC 468


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 554 LSGLPGESAGCGSFFIYFDKC 492
           + G+  ES      + YFDKC
Sbjct: 448 MPGVKFESVNIDKLYTYFDKC 468


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 405 NNKNHNKEIYYYI 367
           N+ N+NK++YY I
Sbjct: 98  NDNNYNKKLYYNI 110


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 423 FSKLQTNNKNHNKEIYYYI 367
           ++    N  N+NK++YY I
Sbjct: 94  YNNYNNNYNNYNKKLYYNI 112


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 506 YFDKCLLEGFRHYYTVTL 453
           Y ++CLLE  R Y  V L
Sbjct: 399 YLERCLLETLRMYPPVPL 416


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 315 STLEAYSFKVSFSLWVYLFVSKSIFTIIL 229
           STL ++    S +LW+ + VS  +  ++L
Sbjct: 555 STLVSFLQPFSNTLWILVMVSVHVVALVL 583


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 524 CGSFFIYFDKCLL 486
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 524 CGSFFIYFDKCLL 486
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 423 FSKLQTNNKNHNKEIYYYIFS 361
           ++    NN N+ K++YY I +
Sbjct: 338 YNNYNNNNYNNYKKLYYNIIN 358


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 524 CGSFFIYFDKCLL 486
           C SF  Y+D C+L
Sbjct: 84  CSSFRFYWDLCML 96


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 248 DFETNRYTHKLNDTLKLYASRVEGKTKKYLKR 343
           DF+T R   ++ + L+ +         KY++R
Sbjct: 429 DFKTTRTREQVTEALRRFVEGYPHAVPKYIQR 460


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 248 DFETNRYTHKLNDTLKLYASRVEGKTKKYLKR 343
           DF+T R   ++ + L+ +         KY++R
Sbjct: 344 DFKTTRTREQVTEALRRFVEGYPHAVPKYIQR 375


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 248 DFETNRYTHKLNDTLKLYASRVEGKTKKYLKR 343
           DF+T R   ++ + L+ +         KY++R
Sbjct: 663 DFKTTRTREQVTEALRRFVEGYPHAVPKYIQR 694


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 408 TNNKNHNKEIYYYIF 364
           TNN N NK   YYI+
Sbjct: 137 TNNNNTNKYKDYYIW 151


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 53  KNYRHIIS*VTVKL*LYLGYSLIRMDC 133
           KNY      V   + LY G + I+ DC
Sbjct: 3   KNYHFFFILVITLIFLYFGEADIKKDC 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,254
Number of Sequences: 438
Number of extensions: 3549
Number of successful extensions: 26
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)