Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G17
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical pr...    70   7e-13
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    33   0.070
U41275-3|AAA82466.1|  612|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical...    28   2.6  
U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical pr...    28   3.5  
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    28   3.5  
U23529-5|AAL32212.2|  385|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical
           protein M04B2.4 protein.
          Length = 527

 Score = 70.1 bits (164), Expect = 7e-13
 Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
 Frame = +3

Query: 150 PEHADIVIIGRGFIGASTAYWLKKR-TGEGLSVVILEEDFSYKASQENLEHVALTRHFAL 326
           P  A+IVIIG G  G+STA+WLK+R   E   VV++E +  +  S   L    +T+ F++
Sbjct: 91  PYRAEIVIIGGGLSGSSTAFWLKERFRDEDFKVVVVENNDVFTKSSTMLSTGGITQQFSI 150

Query: 327 PENILLSQFTADFLRDVNCHL-----GDVDLDYNPTGSLVLA 437
           PE + +S FT +FLR    HL        D+++ PTG L LA
Sbjct: 151 PEFVDMSLFTTEFLRHAGEHLRILDSEQPDINFFPTGYLRLA 192


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 33.5 bits (73), Expect = 0.070
 Identities = 17/58 (29%), Positives = 31/58 (53%)
 Frame = -1

Query: 391 PRWQLTSLKKSAVNCERSIFSGSAKCRVSATCSKFSCDALYEKSSSKITTERPSPVRF 218
           P+W++T  K  +V     +F G+ K +V +T S   CDA + K+  K  + +P  + +
Sbjct: 735 PKWRMTCNKCPSVV---GLFEGAIKVKVDSTRSCEQCDAQFIKAEFKPNSGKPGAIEY 789


>U41275-3|AAA82466.1|  612|Caenorhabditis elegans Hypothetical
           protein T25D1.1 protein.
          Length = 612

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 15  FRRLNKVNDMLIRFYSTLSPLIKTWNVIS 101
           F +++KVND++I + +T S   K +NVI+
Sbjct: 388 FDKIDKVNDLMICYAATSSSTSKKYNVIN 416


>AF040642-10|AAB94949.2|  576|Caenorhabditis elegans Hypothetical
           protein C50D2.1 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = -1

Query: 367 KKSAVNCERSIFS-GSAKCRVSATCSKFSCDALYEKSSSKITTERPSPVRFFNQ*AVEAP 191
           K S V   +SI   G +   + A C+KF+  A      SK+  +     R + +  VE  
Sbjct: 301 KVSQVTTRKSIHEVGLSVKEIYALCAKFAPMANQHCYKSKVEEQFIERCRGYQKDCVEFI 360

Query: 190 IKPRPIITI-SACSGGVNSCFLSLNNTGMSF 101
            K RP+  I ++ S GV   +   N  G+ +
Sbjct: 361 AKARPLGAIANSFSSGVGLTYYDWNVNGIPY 391


>U23529-6|AAL32208.1|  384|Caenorhabditis elegans Hypothetical
           protein C15B12.1 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 162 DIVIIGRGFIGASTAYWLKKRTGEGLSVVILEE 260
           D+V++G G  G+ TAY  +K    GL  ++LE+
Sbjct: 6   DVVVVGAGIFGSCTAYNCQK---IGLKTLLLEQ 35


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +3

Query: 9   NYFRRLNKVNDMLIRFYSTLSPLIKTWNVISKDI 110
           N +  +NK ND++I   +T++P ++ +N I+K+I
Sbjct: 429 NKYIDINKYNDIIITHENTVNPTVE-FNTINKEI 461


>U23529-5|AAL32212.2|  385|Caenorhabditis elegans Hypothetical
           protein C15B12.8 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 162 DIVIIGRGFIGASTAYWLKKRTGEGLSVVILEE 260
           D++++G G  G+ TAY  ++    GL  ++LE+
Sbjct: 7   DVIVVGAGIFGSCTAYHCQRL---GLRTLLLEQ 36


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 397 TSPRWQLTSLKKSAVNCERSIFSGSAKCRVSATCSKFSCDALYEKSSSKITTERPS 230
           +SP    TSL  +AV  E SI S S      +T    S  + Y  SSS      P+
Sbjct: 428 SSPSTAGTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLSTYTPSSSTAGATSPA 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,267,917
Number of Sequences: 27780
Number of extensions: 178844
Number of successful extensions: 525
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)