Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_G15
(622 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 47 1e-05
03_02_0484 + 8805053-8805538 46 2e-05
03_02_0483 - 8804021-8804485 46 2e-05
03_02_0478 + 8775892-8776377 45 4e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 40 0.002
01_01_0229 - 1943473-1943922 39 0.003
01_01_0231 + 1951047-1951499 39 0.004
09_04_0031 + 13946692-13946774,13947007-13948012 38 0.006
09_04_0030 + 13940168-13940250,13940703-13941714 38 0.006
09_04_0029 - 13932414-13933416,13933821-13933903 38 0.008
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 37 0.015
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 37 0.015
09_04_0028 - 13928542-13929538,13929736-13929818 36 0.026
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 36 0.026
01_01_0227 + 1933247-1933699 35 0.045
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 34 0.079
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 33 0.14
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 33 0.18
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 33 0.24
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 31 0.74
06_01_1017 - 7951985-7952425 30 1.3
02_02_0077 - 6586638-6587165 30 1.3
06_03_0967 - 26395537-26396590,26400918-26401111 29 3.0
06_03_0861 - 25486801-25486997,25487334-25487904,25488874-254889... 29 3.0
03_02_0504 - 8976973-8979414 29 3.9
01_01_0464 - 3431298-3431315,3431586-3433339,3433340-3433589,343... 29 3.9
05_07_0296 - 29061900-29061923,29062026-29062440,29062529-290625... 28 5.2
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25... 28 6.9
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23... 28 6.9
10_02_0061 - 4812903-4812940,4813140-4813536 28 6.9
09_04_0470 + 17875119-17875239,17875327-17875496,17875637-178757... 28 6.9
01_06_1285 - 35995943-35996087,35996909-35997697,35997802-359978... 28 6.9
01_05_0812 + 25444351-25444658,25444967-25445231,25445303-254453... 28 6.9
>03_02_0485 - 8808139-8808618
Length = 159
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = -2
Query: 429 HVSCWDVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYVLPE 274
HV DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE
Sbjct: 63 HVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPE 122
Query: 273 GCSPETVESRLSSDGVLTVIAPRKLPE 193
PE +++ + +GVLTV P++ P+
Sbjct: 123 NTKPEQIKASM-ENGVLTVTVPKEEPK 148
>03_02_0484 + 8805053-8805538
Length = 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = -2
Query: 429 HVSCWDVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYVLPE 274
HV DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE
Sbjct: 65 HVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPE 124
Query: 273 GCSPETVESRLSSDGVLTVIAPRKLPE 193
PE +++ + +GVLTV P++ P+
Sbjct: 125 NTKPEQIKASM-ENGVLTVTVPKEEPK 150
>03_02_0483 - 8804021-8804485
Length = 154
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = -2
Query: 429 HVSCWDVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYVLPE 274
HV DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE
Sbjct: 58 HVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPE 117
Query: 273 GCSPETVESRLSSDGVLTVIAPRKLPE 193
PE +++ + +GVLTV P++ P+
Sbjct: 118 NTKPEQIKASM-ENGVLTVTVPKEEPK 143
>03_02_0478 + 8775892-8776377
Length = 161
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Frame = -2
Query: 429 HVSCWDVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYVLPE 274
HV DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+
Sbjct: 65 HVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPD 124
Query: 273 GCSPETVESRLSSDGVLTVIAPRK 202
PE +++ + +GVLTV P++
Sbjct: 125 NAKPEQIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -2
Query: 432 NHVSCWDVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYVLP 277
+HV D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LP
Sbjct: 53 SHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLP 112
Query: 276 EGCSPETVESRLSSDGVLTVIAPR 205
E + V++ L +GVLTV P+
Sbjct: 113 ENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -2
Query: 432 NHVSCWDVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYVLP 277
+HV D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LP
Sbjct: 52 SHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLP 111
Query: 276 EGCSPETVESRLSSDGVLTVIAPR 205
E + V++ + +GVLTV P+
Sbjct: 112 ENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Frame = -2
Query: 432 NHVSCWDVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYVLP 277
+HV D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LP
Sbjct: 53 SHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLP 112
Query: 276 EGCSPETVESRLSSDGVLTVIAPR 205
E + V++ + +GVLTV P+
Sbjct: 113 ENAKVDQVKAGM-ENGVLTVTVPK 135
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 506 KITKDTDVIVKVEYSGVCGTDLHIIQGEF 592
++ ++ DV +KV Y G+C TDLHII+ E+
Sbjct: 28 RVQQEDDVTIKVLYCGICHTDLHIIKNEW 56
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 515 KDTDVIVKVEYSGVCGTDLHIIQGEF 592
KD DV +KV Y G+C TDLHI++ ++
Sbjct: 31 KDDDVTIKVLYCGICHTDLHIVKNDW 56
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 515 KDTDVIVKVEYSGVCGTDLHIIQGEF 592
KD DV +KV Y G+C TDLH+++ ++
Sbjct: 31 KDDDVTIKVLYCGICHTDLHVVKNDW 56
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 512 TKDTDVIVKVEYSGVCGTDLHIIQGEFQH 598
T D DV +K+ + G+C +DLH I+ E++H
Sbjct: 38 TGDDDVAIKILFCGICHSDLHCIKNEWKH 66
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 512 TKDTDVIVKVEYSGVCGTDLHIIQGEFQH 598
T D DV++K+ Y G+C +DLH I+ E+++
Sbjct: 28 TGDDDVVIKILYCGICHSDLHSIKNEWKN 56
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 35.9 bits (79), Expect = 0.026
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 506 KITKDTDVIVKVEYSGVCGTDLHIIQGEF 592
++ ++ DV +KV Y G+C TDLH I+ E+
Sbjct: 28 RVQEEDDVTIKVLYCGICHTDLHTIKNEW 56
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 512 TKDTDVIVKVEYSGVCGTDLHIIQGEFQH 598
T D DV +KV Y G+C +DLH I+ E+++
Sbjct: 45 TGDDDVAIKVLYCGICHSDLHTIKNEWRN 73
>01_01_0227 + 1933247-1933699
Length = 150
Score = 35.1 bits (77), Expect = 0.045
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -2
Query: 354 VEGKHEEKKDQHGYISRQFTRRYVLPEGCSPETVESRLSSDGVLTVIAPRKLPEALEGQR 175
V+GK++E+ S +F RR+ LP G + V + + +GVLTV P++ E + Q
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE--ETKKPQL 143
Query: 174 K-IPIT 160
K IPI+
Sbjct: 144 KAIPIS 149
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 491 NYPLPKITKDTDVIVKVEYSGVCGTDLH 574
NY L K T DV+VKV Y G+C TD+H
Sbjct: 26 NYTLRK-TGPEDVVVKVLYCGICHTDIH 52
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = -2
Query: 417 WDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ----FTRRYVLPEGC 268
+D+ + EE+ V D +V+ G+H++++ + G+ + + R LP+ C
Sbjct: 148 FDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDEC 207
Query: 267 SPETVESRLSSDGVLTVIAPRKLPEALEGQRKIPITQTGPVRKEMKESAND 115
V + L +GVL V P+ E +RK+ Q ++K + E+ +D
Sbjct: 208 DKSKVRAEL-KNGVLLVTVPK-----TEVERKVIDVQIKYLKKLVMENCSD 252
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 524 DVIVKVEYSGVCGTDLHIIQGEF 592
DV +KV+Y G+C TDLH I ++
Sbjct: 37 DVTIKVKYCGMCHTDLHFIHNDW 59
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 491 NYPLPKITKDTDVIVKVEYSGVCGTDLHIIQGEF 592
+YPL + D DV+VK+ + G+C +DL I+ E+
Sbjct: 24 SYPL-RAKGDEDVVVKILFCGICHSDLSTIKNEW 56
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 31.1 bits (67), Expect = 0.74
Identities = 11/35 (31%), Positives = 25/35 (71%)
Frame = +2
Query: 485 VNNYPLPKITKDTDVIVKVEYSGVCGTDLHIIQGE 589
+ ++ +P+ K ++++K + GVC +DLH+++GE
Sbjct: 64 LEDFRMPR-PKAGELLIKTKACGVCHSDLHVLKGE 97
>06_01_1017 - 7951985-7952425
Length = 146
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = -2
Query: 387 ISVKTADGYIVVEGKHEEKKDQHGYISR----QFTRRYVLPEGCSPETVESRLSSDGVLT 220
++V+ A + E + E +KD +++ +F R LP E + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 219 VIAPRKLPEALEGQRKIPIT 160
V+ P++ A R I ++
Sbjct: 124 VVVPKEPAPARPRTRPIAVS 143
>02_02_0077 - 6586638-6587165
Length = 175
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 303 QFTRRYVLPEGCSPETVESRLSSDGVLTVIAPRKLPEALEGQRKIPITQTG 151
+F RR+ LPE + V + DGVLTV +K P + R + + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -2
Query: 537 LTMTSVSFVILGKG*LLTYLRVEVFPSNRTASILMNHVSCWDVQHFAPEEISVKTADGY 361
L V+ + G ++T +++ S + + N + WD++ +APE ++KT G+
Sbjct: 281 LRKNEVTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGH 339
>06_03_0861 -
25486801-25486997,25487334-25487904,25488874-25488976,
25489281-25489376,25490319-25490449
Length = 365
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 275 RVVLQKPSSRGCLPMESSLSSLLGSCQKRW 186
RV S+ GCLP+E +L++L G C + +
Sbjct: 198 RVAFAGLSAIGCLPLERTLNALRGGCVEEY 227
>03_02_0504 - 8976973-8979414
Length = 813
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 537 KWNTLESAVLISILFRVNSSIEG 605
KW +LESA+ ++++FRV ++G
Sbjct: 107 KWRSLESALGVALMFRVRLCLDG 129
>01_01_0464 -
3431298-3431315,3431586-3433339,3433340-3433589,
3433716-3434041,3434297-3434618
Length = 889
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 353 TTIYPSAVFTDISSGAKCCTSQQETWFIKMEAVL-FDGKTS 472
T +P+A+ DISS ++ WF K+E++L D TS
Sbjct: 644 TCAFPNAIIIDISSNNFSGPLPKDKWFKKLESMLHIDTNTS 684
>05_07_0296 -
29061900-29061923,29062026-29062440,29062529-29062566,
29062689-29062741,29062851-29063034,29064486-29064669,
29064761-29064916,29064998-29065173,29065277-29065454,
29066015-29066421
Length = 604
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = -2
Query: 378 KTADGYIVVEGKHEEKKDQHGYISRQFTRRYVLPE------GCSPETVESRLSSDGVLTV 217
+TA GY+ + E ++D H + TR+ + + C P T+++ + G+
Sbjct: 343 RTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQADAYTTGLSMK 402
Query: 216 IAPRKLPEALEGQRKIPITQTGPVRKEMKE 127
R+ + K+P T+ + KE KE
Sbjct: 403 EIERRRKIGAANKGKVPWTKGRKLSKEHKE 432
>12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-250315,
250429-250556,250764-250862,250953-251061,251301-251380,
251464-251691,251768-251833,251970-252086,252538-252735,
252847-252963,253056-253115,253228-253314,253419-253502,
253623-253757,253837-253899,253979-254083,254174-254286,
254374-254626,254715-254851,254970-255248,255352-256354,
256450-256935,257023-257193,257285-257470,257820-257942,
258024-258134,258225-258395
Length = 1708
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 489 LTYLRVEVFPSNRTASILMNH-VSCWDVQHFAPEEISVKTADGYIVVEGKH 340
LTYL ++ + A+ +MNH WD H ++++VK A+ + + H
Sbjct: 1375 LTYLYIQYDEFDNAATTIMNHSPDAWD--HMQFKDVAVKVANVELYYKAVH 1423
>11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-234912,
235048-235175,235383-235481,235572-235680,235920-235999,
236083-236310,236387-236452,236589-236705,237142-237339,
237451-237567,237660-237719,237832-237918,238023-238106,
238233-238367,238446-238508,238588-238692,238781-238893,
238981-239233,239322-239458,239577-239855,239958-240960,
241054-241539,241627-241797,241890-242075,242426-242548,
242630-242740,242834-243004
Length = 1708
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 489 LTYLRVEVFPSNRTASILMNH-VSCWDVQHFAPEEISVKTADGYIVVEGKH 340
LTYL ++ + A+ +MNH WD H ++++VK A+ + + H
Sbjct: 1375 LTYLYIQYDEFDNAATTIMNHSPDAWD--HMQFKDVAVKVANVELYYKAVH 1423
>10_02_0061 - 4812903-4812940,4813140-4813536
Length = 144
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 321 VGPSSLRVFLQRLYTRQRSSPISPLGRNVARPNKRRGSS--KWKRFYSMEKLRPLNTSTI 494
+ PSS+ + L R SP+ P R ++ GS+ +W++++ +E R N+ST
Sbjct: 1 MSPSSMFAPVLVLPFRSPCSPLPPSHWRPRRGLRQNGSTRWRWRQWWWLEATRRANSSTA 60
Query: 495 I 497
+
Sbjct: 61 V 61
>09_04_0470 +
17875119-17875239,17875327-17875496,17875637-17875784,
17876491-17876697,17877550-17877656
Length = 250
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 84 INSFTKFTPCYH*QILSSPFAQDPXXXXXXXXDLP 188
I+S T TPC +L+ P+A+D D+P
Sbjct: 176 IHSLTAVTPCALLDVLAPPYAEDLGRPSTYFSDIP 210
>01_06_1285 -
35995943-35996087,35996909-35997697,35997802-35997871,
35997989-35998220
Length = 411
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 399 APEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYVLPE--GCSPETVESRLSSDG 229
A + + +T DGY G+H ++ + +R P SPET+E+ + +DG
Sbjct: 199 AAADAATQTEDGYRSSRGRHAQRAAAAA-AQEELSREETSPPTASTSPETLEALIKADG 256
>01_05_0812 +
25444351-25444658,25444967-25445231,25445303-25445384,
25446139-25446212,25446308-25446368,25446482-25446624
Length = 310
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -2
Query: 405 HFAPEEISVKTAD--GYIVVEGKHEEKKDQHGYISRQFTRRYVLPEGCSPET--VESRLS 238
HF E I TA G +VV +EK+ R F R+ +LP S ET +
Sbjct: 183 HFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERDFARKILLPGRPSEETRVGDIMTE 242
Query: 237 SDGVLTVIAPRKLPEALE 184
D ++TV + + +A+E
Sbjct: 243 EDKLITVSSNTNILQAME 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,260,739
Number of Sequences: 37544
Number of extensions: 350184
Number of successful extensions: 978
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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