Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G12
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   1.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   1.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   9.4  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 182 LISAIASVICFSTTSNKVTWYPTEANNIAHDLPI 81
           L+     + C   TS  V      ANN+AH + +
Sbjct: 6   LLVVCLGIACQDVTSAAVNHQRKSANNLAHSMKV 39


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 446 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 297
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 446 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 297
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 531 WFCPRRWNYLY 499
           W C  RW  +Y
Sbjct: 378 WICEHRWRQIY 388


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +1

Query: 226 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKK 342
           NL  DE F  V   CD        + +  C P   EL K
Sbjct: 24  NLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLK 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,188
Number of Sequences: 438
Number of extensions: 3825
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)