Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_G09
(661 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 25 0.64
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 1.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 1.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.5
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 6.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 6.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 6.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 6.0
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 25.0 bits (52), Expect = 0.64
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 180 DRSILAIXXXXXXXDSFEYWIFLAQHQENIRDYPC 284
DRS + DS E I L +EN R+Y C
Sbjct: 36 DRSNMTFHELKKLRDSSEARIKLINEEENFRNYGC 70
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 274 TTPVDDKESEHREGFTALV 330
T P+DD S+ EGF A++
Sbjct: 150 TNPLDDSISQANEGFCAVI 168
Score = 21.4 bits (43), Expect = 7.9
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Frame = +1
Query: 295 ESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDV--PSIINLV-----DI 450
E +H+ F + + + P ++ SV N++ Y P ++ D+
Sbjct: 279 EQQHKAMFLVVTAQPVHSAYKAPEETIISSVFTTRHNATCYLSHVDPDVVQYFGYLPQDM 338
Query: 451 VNIQAFDYYTPERNPXEAD 507
V FD+Y PE P D
Sbjct: 339 VGRSLFDFYHPEDLPFIKD 357
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 274 TTPVDDKESEHREGFTALV 330
T P+DD S+ EGF A++
Sbjct: 145 TNPLDDSISQANEGFCAVI 163
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST--TGRTWKLDS 654
+++WI A + +V LGI+T T T LDS
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDS 294
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST 627
+++WI + A + +V LGI+T
Sbjct: 261 VSFWINHEATSARVALGITT 280
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST 627
+++W+ A +V LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST 627
+++W+ A +V LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 4.5
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST 627
+++W+ A +V LG++T
Sbjct: 179 VSFWLNRNATPARVALGVTT 198
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = -3
Query: 167 YCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPP 60
YC A++ + ++AV D++ F ++ PP
Sbjct: 216 YCYAQKHVKSIRAVTKLPDTSMAKSFVRKVHATKPP 251
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 568 INYWIQNGAPTHKVVLGIST 627
+++W+ A +V LGI+T
Sbjct: 233 VSFWLNREATADRVSLGITT 252
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 118 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 225
++ T N AL LAE Y G +S KR+ K+
Sbjct: 879 ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 914
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 118 QARTAFTNSALLLAEQYGFDGIDLSWQLPKRKPKKI 225
++ T N AL LAE Y G +S KR+ K+
Sbjct: 917 ESSTDSRNPALALAEPYNQRGTVVSPPPTKRRTMKV 952
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,919
Number of Sequences: 438
Number of extensions: 3119
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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