Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_G07
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical ...    32   0.28 
L14433-7|AAA27972.1|  469|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical p...    29   2.6  
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet...    29   2.6  
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ...    28   6.1  

>AC084152-9|AAK39313.1|  296|Caenorhabditis elegans Hypothetical
           protein Y102A11A.1 protein.
          Length = 296

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +3

Query: 306 PVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAQHFSMARPQLASFSSYADVSDR 485
           PV  I N+  G  A Q  P+PQ           + IP Q F+   PQL +   +  +S +
Sbjct: 176 PVQPIFNINSGPPAAQ--PAPQ----------QIMIPPQLFNQQMPQLQNPQQHNQISQQ 223

Query: 486 VEFESYDDDVPPVKWPSSTPLTTPV-VLIPGLYTYHL 593
            + +      P   +P+S+ +  P  V+   LYT  L
Sbjct: 224 TQSQMLQPQRPQQLYPASSAIMQPSGVIHLNLYTIQL 260


>L14433-7|AAA27972.1|  469|Caenorhabditis elegans Hypothetical
           protein C50C3.1 protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +3

Query: 294 FASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAQHFSMARPQLASFSSYAD 473
           F +    D  N+    +     P P +T+ +S        P Q+      Q+  F +  D
Sbjct: 247 FGTFDALDSPNLTTDAIIRARTPVPIITSGSSPDIPQCVSPVQN---TYQQI--FENNTD 301

Query: 474 VSDRVEFESYDDDVPPVKWPSSTPL-TTPVVLI 569
            SD V+    D  +PP  +PSS P  TTP++ +
Sbjct: 302 TSDEVQ----DFSIPPPPYPSSFPAPTTPLLAL 330


>AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical
           protein K09D9.11 protein.
          Length = 861

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
 Frame = -3

Query: 177 TLKLSFQDCFP-----YSCLRREYQRHLFRPIIVLLLDTPRDAPMGSFHVFLQER 28
           T+  +F++ FP     ++ +++ YQ+H  +      ++ P+  P+ SFH++++ER
Sbjct: 595 TIPWNFKETFPDKSEQFAEIQKIYQKHSKK---AFRMNVPQKFPVSSFHIWIEER 646


>Z35663-14|CAA84733.1|  805|Caenorhabditis elegans Hypothetical
           protein T04A8.16 protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +3

Query: 285 ESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAQHFSMARPQLASFSS 464
           E  F  VPV D+SN+        S PS Q     +  + P    +Q F+  + +LA   +
Sbjct: 161 ELLFPEVPVDDLSNLNFNNQPSPSTPSNQPFKSPTRNFPPSPSNSQKFT--KEELAVLFT 218

Query: 465 YADVSDR--VEFESYD 506
            ++++++  V F +YD
Sbjct: 219 TSNINNKLYVPFHNYD 234


>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
           protein 3 protein.
          Length = 1599

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 358 SDCRATVPGLTLEISYTGTDANEDS*KAGLSTDSAFTAFV 239
           +DC  T+P LTLE++   T  N D+   G+     F  F+
Sbjct: 783 ADCLLTLPRLTLELTSKRTRDNIDNYVGGIHISGQFKGFM 822


>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
           protein R52.2 protein.
          Length = 1019

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 17/70 (24%), Positives = 31/70 (44%)
 Frame = +3

Query: 282 QESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPAQHFSMARPQLASFS 461
           Q S+  ++P Y I      T+ LQ++PS Q +   +   Q L+   Q      P + + S
Sbjct: 13  QSSNQPTIPTYLIQPSIQSTIPLQTVPSTQQSCQHTLPQQTLASAQQPIQQTLPYVQN-S 71

Query: 462 SYADVSDRVE 491
           +Y      ++
Sbjct: 72  NYQHYQSAIQ 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,719,949
Number of Sequences: 27780
Number of extensions: 274902
Number of successful extensions: 862
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)