Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_F21
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    39   7e-05
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    37   3e-04
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    36   7e-04
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           35   0.002
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    32   0.008
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    31   0.014
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    30   0.043
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    29   0.057
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    28   0.18 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   0.40 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   0.71 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   5.0  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   6.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 39.1 bits (87), Expect = 7e-05
 Identities = 26/82 (31%), Positives = 41/82 (50%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L  +V   ++ YA  VWSK+ Q++     L  VQR  ++ V  A  T        L  LT
Sbjct: 778  LLASVSESVMRYAAPVWSKELQKREPGRLLERVQRKMALRVARAFRTVRYETATLLAGLT 837

Query: 225  PLHLHVEKVARLTMHRMYALGR 290
            P+ L +++ AR+   R+ A+ R
Sbjct: 838  PICLLLDEDARV-YQRLSAVNR 858


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 28/81 (34%), Positives = 35/81 (43%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L  AV   II YA  VWS+    Q    +LA VQR  +  VT +  +       AL  L 
Sbjct: 785  LLAAVAESIIRYAAPVWSEATDLQWCQRKLAQVQRPLARGVTSSFVSVAYETGVALAGLV 844

Query: 225  PLHLHVEKVARLTMHRMYALG 287
            P  L V + AR     + A G
Sbjct: 845  PFRLLVREDARCHRRLLAAPG 865


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 35.9 bits (79), Expect = 7e-04
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            LY A+VRP++ YA ++W+        C+R+ S+QR+ + +   A     GAA     +L 
Sbjct: 820  LYYALVRPLLEYASIIWNPPTIDG--CSRIESIQRLFTRV---AFRRLFGAA-----SLP 869

Query: 225  PLHLHVEKVARLTMHRMYALGRRQWISQS--MRSFLDSVIETPILGMISDMMIPETNLRK 398
            P         RL +  +++L  R+ +SQ+  +   L S  + P L     + +P  +LR 
Sbjct: 870  PYE------TRLQLFNLHSLSFRRQVSQACFIGGLLLSDTDAPDLLSSISLYVPSRSLRP 923

Query: 399  LYDVEIPLR 425
               + I  R
Sbjct: 924  RDPLSIETR 932


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L  +V   +I YA  +W  +  ++     L  VQR+++  V     T        L  LT
Sbjct: 845  LLASVAESVIRYAAPIWHGEVTKRECRRLLERVQRVSARRVARTFRTVRYETATLLAGLT 904

Query: 225  PLHLHVEKVARL 260
            P+ L +E+ AR+
Sbjct: 905  PICLLIEEDARV 916


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 32.3 bits (70), Expect = 0.008
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L   V   ++ YA  VW++  Q +     L  VQR A+I V  A  T        L  L 
Sbjct: 838  LLAYVAESVLRYAAPVWAEATQVRECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLV 897

Query: 225  PLHLHVEKVARL 260
            P+   + + AR+
Sbjct: 898  PICHLINEDARV 909


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 31.5 bits (68), Expect = 0.014
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 45  LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQR 149
           +Y  +VR ++ Y+CVVWS      S   R+ ++QR
Sbjct: 891 VYNCIVRSVLEYSCVVWSPTT--ASSIARIEAIQR 923


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 29.9 bits (64), Expect = 0.043
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L  AV   II Y   VW++    Q     L  VQR+ +  +T A  +        L    
Sbjct: 788  LLAAVAASIIRYGAPVWTEATDLQWCRRILDRVQRLLAQGITSAFHSTSCEVAVVLAGEL 847

Query: 225  PLHLHVEKVAR 257
            P HL  ++ AR
Sbjct: 848  PYHLLAKEDAR 858


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.057
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L   V    + YA  VW +    Q  C  L  VQR ++I +     T        L  L 
Sbjct: 854  LLANVADSTMRYAAPVWHEAIGNQECCRLLRRVQRKSAIGLARTFRTVRYETAVLLAGLL 913

Query: 225  PLHLHVEKVARLTMHRMYALG---RRQWISQSMRSF 323
            P+ L +++  R+   R   L    RR+   +SM  +
Sbjct: 914  PICLAIKEDTRVHSRRGTGLNCAIRREERQRSMEEW 949


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 27.9 bits (59), Expect = 0.18
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQR-IASILVTGAMSTAPGAALDALLNL 221
            L   V   II Y   +W++   +Q     LAS QR +A  +V G  S +   A+  +  L
Sbjct: 782  LLAGVSEAIIRYGAPIWAEATDRQWCQRMLASFQRPLAQRVVCGFRSISYSVAV-LMPRL 840

Query: 222  TPLHLHVEKVARLTMHRMY 278
             P  L +++ AR   H+ Y
Sbjct: 841  IPHPLLIKEDAR--CHQRY 857


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 21/81 (25%), Positives = 31/81 (38%)
 Frame = +3

Query: 45   LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMSTAPGAALDALLNLT 224
            L  AV   ++ YA  VW +    +     L  VQR ++I V     T        L  L 
Sbjct: 798  LLAAVADSVMRYAAPVWHEALNTRECRRLLERVQRKSAIAVARTFRTVRYETAVLLAGLL 857

Query: 225  PLHLHVEKVARLTMHRMYALG 287
            P+   + +  R+   R  A G
Sbjct: 858  PICRAICEDTRVHSRRGTAAG 878


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 297 IVSSRGRTFCASSTSPPSLHVDVGASDLTEHPEPLQG 187
           IV+SRG T CA+S+     +  +        P  L G
Sbjct: 153 IVNSRGNTLCAASSPNAYTNTTIAVQPAPTQPHELVG 189


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 45  LYTAVVRPIITYACVVWSKKAQQQSVCTRLASVQRIASILVTGAMST 185
           L  AV    + YA  VW      +   + L  VQR A+I V     T
Sbjct: 793 LLAAVADSTMRYAAPVWHGALTNRECRSLLKRVQRKAAIRVARTFRT 839


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 156 SILVTGAMSTAPGAALDALLNLTP 227
           S+LVTG+M  +P A L    + TP
Sbjct: 38  SMLVTGSMPPSPYAPLSMSKSQTP 61


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 92   NHTGVCYYGSDNCRIKPYG 36
            NH GV     D   IK YG
Sbjct: 1179 NHRGVSLQDDDTASIKSYG 1197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,096
Number of Sequences: 2352
Number of extensions: 10756
Number of successful extensions: 36
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)