Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_F18
         (170 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   0.25 
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   1.00 
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   1.00 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    21   4.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    21   7.0  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    20   9.3  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 146 CVGFSRLYCLSPFSLSDGLEAVSLCLS 66
           CVG S L  L  +  SD  E +SLC+S
Sbjct: 250 CVGISFLSVLVFYLPSDSGEKISLCIS 276


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 1.00
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 146 CVGFSRLYCLSPFSLSDGLEAVSLCLS 66
           CVG + L  L  +  SD  E V+LC+S
Sbjct: 256 CVGITFLTVLVFYLPSDSGEKVTLCIS 282


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 1.00
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 146 CVGFSRLYCLSPFSLSDGLEAVSLCLS 66
           CVG S L  L  +  +D  E ++LC+S
Sbjct: 263 CVGISYLSVLVFYLPADSGEKIALCIS 289


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 125 YCLSPFSLSDGLEAVSLCLSGQS 57
           YC   F  + G+  +  C+SGQ+
Sbjct: 361 YCYLFFITNFGINFILYCISGQN 383


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 146 CVGFSRLYCLSPFSLSDGLEAVSLCLS 66
           C+G S L  L  +  SD  E VSL +S
Sbjct: 250 CMGISFLTILVFYLPSDSGEKVSLSIS 276


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 126 EAAKADAERIQV 161
           EAAKAD E+++V
Sbjct: 89  EAAKADNEKLRV 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,161
Number of Sequences: 2352
Number of extensions: 1815
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 35
effective length of database: 481,659
effective search space used: 10114839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)