Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_F13
(407 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1334 - 26224546-26225337 31 0.47
09_04_0430 + 17502387-17503505 30 0.62
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 30 0.81
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 30 0.81
03_02_0719 + 10654842-10654977,10655039-10655124,10655226-106570... 29 1.1
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 29 1.1
11_06_0446 - 23703088-23703681 29 1.4
07_01_0860 - 7142913-7144895 29 1.4
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 1.4
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307... 29 1.4
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 29 1.4
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 29 1.4
01_06_1246 - 35703119-35703811,35704033-35704074,35704355-357045... 29 1.4
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 28 2.5
11_06_0610 - 25449085-25453284 28 3.3
11_06_0598 - 25391923-25393197 28 3.3
05_03_0434 - 13980477-13980937,13981449-13981518 28 3.3
02_05_0512 + 29675835-29675901,29676681-29676813,29677020-296771... 28 3.3
07_01_0516 - 3850252-3852870 27 4.3
06_01_0486 - 3455030-3455770 27 4.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 27 4.3
12_02_1276 - 27487424-27488050,27488258-27489172 27 5.7
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 27 5.7
07_01_1079 + 9770444-9772756 27 5.7
03_05_0576 + 25765137-25766420 27 5.7
03_02_0411 + 8217324-8218172 27 5.7
02_01_0435 - 3164421-3165032 27 5.7
08_02_1468 - 27338052-27339506 27 7.6
07_03_1060 + 23641603-23641959 27 7.6
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 27 7.6
06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390 27 7.6
03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506,879... 27 7.6
02_03_0262 + 17015383-17015619,17017932-17018879 27 7.6
01_05_0138 + 18516689-18518161 27 7.6
>08_02_1334 - 26224546-26225337
Length = 263
Score = 30.7 bits (66), Expect = 0.47
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 163 VQIPS-TSSSPAPREMPSGTPPMRLPFITPPNAND 62
V +P+ +++P P P TPP +LP ++PP +
Sbjct: 113 VSLPAPVTATPPPPPPPPETPPRQLPSVSPPTVGE 147
>09_04_0430 + 17502387-17503505
Length = 372
Score = 30.3 bits (65), Expect = 0.62
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLPFITPPNA 68
P+ P P+ P TPP P TPP A
Sbjct: 160 PAPMQQPQPQPPPQPTPPRAAPLPTPPRA 188
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 157 IPSTSSSPAPREMPSGTPPMRLPFITPP-NANDVVSDLVMANNDKITIFENIS 2
+P+ + AP+ +P PM LP PP N+V D+ ++ T+ E +
Sbjct: 180 VPTPGMTQAPQMVPGALIPMVLPITDPPEEINEVAIDVEREEDEGGTVGETFT 232
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.9 bits (64), Expect = 0.81
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 274 LHVVPSMHCSRGTFNHP-PGKSTQVTA*VQFWQATPD*VQIPSTSSSPAPREMPSGTPPM 98
+H +P + RG P PG +Q +QA P +P + P PR PS P
Sbjct: 26 MHQMPMLPQQRGYAQMPMPGPPSQPPPPQAMYQAHPQ-YPMPGSLPPPPPRP-PSFAPEN 83
Query: 97 RLPFITPP 74
LP +PP
Sbjct: 84 ALPPSSPP 91
>03_02_0719 +
10654842-10654977,10655039-10655124,10655226-10657001,
10657782-10657926,10658017-10658735
Length = 953
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 330 DHESYTPAQVAQSTCLNERCMSSPQC 253
+HE +P V + T LNE C SS C
Sbjct: 684 EHEDLSPLSVLEPTFLNESCWSSDCC 709
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 223 PGKSTQVTA*VQFWQATPD*VQIPSTSSSPAPREMPSGTPPMRLP 89
P KS + +QFWQ P Q+PS+++ P S P ++ P
Sbjct: 572 PDKSAASGSAIQFWQPPP---QLPSSAAGGNPNPSSSAFPYLKKP 613
>11_06_0446 - 23703088-23703681
Length = 197
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 276 AHLGKCSEQPVPECNFHDQQFRHTCEQV---GIFPDAVDCRKFTCAL 407
AH +P + N H QQF C GI PDAV R F +L
Sbjct: 40 AHASPFCAKPNKDANAHLQQFLEICSTYIVKGISPDAVRLRLFLFSL 86
>07_01_0860 - 7142913-7144895
Length = 660
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 178 ATPD*VQIPSTSSSPAPREMPSGTPPMR 95
ATPD +PSTSSS A E TPP R
Sbjct: 632 ATPDLASLPSTSSSVANTE-AMATPPRR 658
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLPFITPPNA 68
P + +P P + P+ TPP R P TPP A
Sbjct: 175 PPQAPAPTPPQAPAPTPP-RAPTPTPPQA 202
>06_03_0073 +
16229369-16230115,16230182-16230431,16230618-16230728,
16230768-16231153
Length = 497
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 300 QPVPECNFHDQQFRHTCEQV---GIFPDAVDCRKFTCAL 407
+P + N H QQF TC G+ PDAV R F +L
Sbjct: 95 KPNEDANAHLQQFLETCSMYTIKGVSPDAVRLRLFLFSL 133
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Frame = -2
Query: 163 VQIPSTSSSPAPR-EMPSGTPPM----RLPFITPPNA 68
VQ P +SP P +P TPP+ R PF TPP++
Sbjct: 353 VQRPPVPTSPRPAAHVPRPTPPLHGGFRAPFSTPPSS 389
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLPFITPPNA 68
P +S+P+P P+ +PP + P +TPP A
Sbjct: 83 PPQASAPSPPHAPAPSPP-QAPAMTPPQA 110
>01_06_1246 -
35703119-35703811,35704033-35704074,35704355-35704576,
35705077-35705466,35705560-35705637
Length = 474
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLPFIT 80
P+ SS P R+ PS TPP R+P +T
Sbjct: 318 PNKSSRPPSRQSPS-TPPSRVPSVT 341
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 157 IPSTSSSPAPREMPSGTPPMRLPFITPPNA 68
+P + +P P E+P PP PF+ PP++
Sbjct: 86 LPPRTDAPMP-EIPIHPPPPVFPFVAPPSS 114
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 175 TPD*VQIPSTSSSPAPREMPSGTPPMRLPFITPPNA 68
TP+ PS S P P P +PP ++ P A
Sbjct: 902 TPESSSPPSKESEPPPTPTPKSSPPSHEEYVPPSPA 937
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 175 TPD*VQIPSTSSSPAPREMPSGTPPMRLPFITPPNA 68
TP+ PS S P P P +PP ++ P A
Sbjct: 952 TPESSSPPSEESEPPPSPTPKSSPPSHEEYVPPSPA 987
>11_06_0598 - 25391923-25393197
Length = 424
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 139 SPAPREMPSGTPPM-RLPFITPPNANDVVSDLV 44
SPA E+PSGT M RL ++ +A++ V+DL+
Sbjct: 162 SPATVELPSGTRRMERLEILSHVDASNNVNDLI 194
>05_03_0434 - 13980477-13980937,13981449-13981518
Length = 176
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 300 QPVPECNFHDQQFRH---TCEQVGIFPDAVDCRKFTCAL 407
+P + N H QQF TC G+ PDAV R F +L
Sbjct: 121 KPNEDANAHLQQFLEICSTCTMKGVGPDAVRLRLFPFSL 159
>02_05_0512 +
29675835-29675901,29676681-29676813,29677020-29677164,
29677586-29678407
Length = 388
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 26 FIVIRHH*IANDIVSVWWRDEWQPHGWS-ATWHLPR 130
F+ +R + D S WW + P WS + W PR
Sbjct: 134 FLKLRFSRLNTDCTSSWWNADRSPPWWSPSRWCCPR 169
>07_01_0516 - 3850252-3852870
Length = 872
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 157 IPSTSSSPAPREMPSGTPPMRLPFITPP 74
I ++S++P PR +P PP P PP
Sbjct: 3 ISTSSAAPPPRLLPPQPPPTSRPLPPPP 30
>06_01_0486 - 3455030-3455770
Length = 246
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLPFITPPN 71
P T SP P +P TPP P++ PP+
Sbjct: 126 PPTPPSPPPY-VPPPTPPSPPPYVPPPS 152
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 157 IPSTSSSPAPREMPSGTPPMRLPFITPP 74
+P P P +P TPP P++ PP
Sbjct: 112 VPPYIPPPTPPYVPPPTPPSPPPYVPPP 139
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 226 PPGKSTQVTA*VQFWQ-ATPD*VQIPSTSSSPAPREMPSGTPPMRLPFITPP 74
PP +S + +F +TPD Q+ TS SP P + PS PP P PP
Sbjct: 311 PPARSRRTPPRTRFSTGSTPDTKQV--TSPSPRPVQ-PSNAPPPPPPPPPPP 359
>12_02_1276 - 27487424-27488050,27488258-27489172
Length = 513
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 131 CW*TGCRRNLHSIR 172
CW TG RR LH IR
Sbjct: 240 CWLTGMRRTLHGIR 253
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 115 SGTPPMRLPFITPPNANDVVSDLVMANNDKI 23
S TPP+RLP PP V ++MA D +
Sbjct: 39 SATPPVRLPPSAPPPLVGVPPGVLMARIDAV 69
>07_01_1079 + 9770444-9772756
Length = 770
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 149 RRNLHSIRRGLPELYSCRDLRAFTWRM 229
R HS+ G+ E SC+D WRM
Sbjct: 423 RNRKHSVIMGVAEFLSCKDYLDQRWRM 449
>03_05_0576 + 25765137-25766420
Length = 427
Score = 27.1 bits (57), Expect = 5.7
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -2
Query: 232 NHPPGKSTQVTA*VQFWQATPD*VQIPSTSSSPAPREMPSGTPPMRLPFITPPNA 68
NH K +A + + P+ PS S SP+P PS PP P +PP A
Sbjct: 45 NHGRLKKPSASASRRKKRGGPEAPPSPSPSPSPSPPPQPSSPPP---PPPSPPPA 96
>03_02_0411 + 8217324-8218172
Length = 282
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 74 WWRDEWQPHGWSATWHLPRCW*TGCRRNLH 163
WW W P W PR GC R LH
Sbjct: 238 WWPRLWSPEAWR-----PRTASRGCGRRLH 262
>02_01_0435 - 3164421-3165032
Length = 203
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 154 PSTSSSPAPREMPSGTPPMRLP 89
PSTSSS P P PP LP
Sbjct: 70 PSTSSSAPPPPPPQHQPPQHLP 91
>08_02_1468 - 27338052-27339506
Length = 484
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 57 TTSLAFXXXXXXXXXXXXPLGISLGAGELDVEGICTQSGVACQNCTHAVTCVL---LPGG 227
TTSL + +G LGAG + + + G+AC V C L G
Sbjct: 273 TTSLLYIFPHSLSCAVSTRVGHELGAGRPERARLAARVGLACGAALGVVACAFAASLRGV 332
Query: 228 WLKV 239
W ++
Sbjct: 333 WARM 336
>07_03_1060 + 23641603-23641959
Length = 118
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 152 RNLHSIRRGLPELYSCRDLRAFTWRMVEGTSRTMH*GDDMQRSFRQVL 295
R H +RRG E D A TWR E R G MQR+ R+++
Sbjct: 28 RREHLVRRGSVETGDADDGAAATWRR-EHLVRRGGGGQAMQRTARRLI 74
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = -2
Query: 163 VQIPSTSSSPAPR-EMPSGTPP----MRLPFITPPNA 68
VQ P + P P +P TPP R PF TPP++
Sbjct: 227 VQRPPVPTGPRPAAHVPRPTPPPHGGFRAPFSTPPSS 263
>06_01_0910 - 7016932-7017759,7018059-7018351,7018952-7019390
Length = 519
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 181 QATPD*VQIPSTSSSPAPREMPSGTPPMRLPFITPPNANDV 59
Q+TPD + +PST+SS A +P+ T P AN++
Sbjct: 113 QSTPDDISLPSTNSSAA--AVPTTTNKAEQQQTGDPGANNM 151
>03_02_0482 +
8798931-8799024,8799118-8799253,8799435-8799506,
8799583-8799654,8799798-8799869,8800133-8800204,
8800530-8800627,8800892-8801062,8801141-8801473,
8802494-8802739,8802884-8803017,8803132-8803344
Length = 570
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 117 GISLGAGELDVEGICTQSGVACQNCTHAVTCVLL 218
GI L E DV+ C GV C + T V C++L
Sbjct: 47 GIFLNWREQDVDP-CNWKGVGCDSHTKRVVCLIL 79
>02_03_0262 + 17015383-17015619,17017932-17018879
Length = 394
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 157 IPSTSSSPAPREMPSGTPPMRLPFITPPNA 68
+P TSS+PAP G + P +TP +A
Sbjct: 30 LPPTSSAPAPVAYGGGGGDLGGPMVTPDDA 59
>01_05_0138 + 18516689-18518161
Length = 490
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 222 GGWLKVPLEQCIEGTTCNAHLGKCSEQP 305
GGWL L C E N H G+ P
Sbjct: 105 GGWLAAALTMCGEHLVANVHSGETVSLP 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,746,064
Number of Sequences: 37544
Number of extensions: 300650
Number of successful extensions: 1221
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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