Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_F09
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 157 1e-39
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 62 5e-11
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 58 1e-09
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 52 6e-08
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 46 4e-06
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 40 3e-04
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 34 0.013
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 29 0.47
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 27 1.4
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 25 7.7
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 7.7
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 157 bits (380), Expect = 1e-39
Identities = 76/158 (48%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Frame = +3
Query: 60 LQCLLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYI 239
++ LL +Q DFV+ A+ S I V+K D+DK ++ +M G+ GDTT FAEYI
Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI 60
Query: 240 AKNIQLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENG-PELYFMD 416
A NI LY +R+ L P A A+FTR+ LA LRS PY VNIL+ GY+ G PEL+++D
Sbjct: 61 AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD 120
Query: 417 YLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATEDESI 530
YLA+ V+VP+A GY + LSI DRY+K D T DE++
Sbjct: 121 YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAV 158
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 62.1 bits (144), Expect = 5e-11
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Frame = +3
Query: 69 LLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAK- 245
+L ++ D VMIAAD S+ + D +++ K+ D ++G GD+ D Q + K
Sbjct: 46 VLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKL 105
Query: 246 NIQLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKEN-GPELYFMDYL 422
I+ +GY L P+ + + L PY+ +++ G D EN P + F D
Sbjct: 106 EIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLR 165
Query: 423 ASSVKVPFAAHGYGGYLSLSIMDRYHKKDATEDE 524
++ P A G+ +L+L ++ + AT+D+
Sbjct: 166 GTTYSAPAIATGFAMHLALPML-----RKATDDD 194
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 57.6 bits (133), Expect = 1e-09
Identities = 38/164 (23%), Positives = 75/164 (45%)
Frame = +3
Query: 69 LLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKN 248
++G+ D +++ AD + ++ + K++ IS + G DT I+ N
Sbjct: 38 IVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSN 97
Query: 249 IQLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLAS 428
I+L+ + + A +++L Y Y V +GGYD + GP L+ + S
Sbjct: 98 IELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLV---LGGYDCK-GPHLFTIAAHGS 153
Query: 429 SVKVPFAAHGYGGYLSLSIMDRYHKKDATEDESI*HFEEVCARG 560
S K+P+ A G G ++S+++ ++ D E++ +E G
Sbjct: 154 SDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAG 197
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 52.0 bits (119), Expect = 6e-08
Identities = 31/154 (20%), Positives = 69/154 (44%)
Frame = +3
Query: 69 LLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKN 248
+ ++ D V++AAD T+ + DK+ +++D + G DT A+ +
Sbjct: 27 ITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYY 86
Query: 249 IQLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLAS 428
+ +Y+++ G++ AA ++ +++ GYD++ G ++Y + S
Sbjct: 87 LSMYRIQFGHDPSVHTAATLASEMC---YQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGS 143
Query: 429 SVKVPFAAHGYGGYLSLSIMDRYHKKDATEDESI 530
K P A G G D +++ T++E++
Sbjct: 144 LHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAV 177
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 46.0 bits (104), Expect = 4e-06
Identities = 29/119 (24%), Positives = 54/119 (45%)
Frame = +3
Query: 72 LGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNI 251
+ I + F ++A D + + + + +++++ D LV+G G D + I + I
Sbjct: 17 VAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRI 76
Query: 252 QLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLAS 428
LY + ++ + A R L Y + PY+V + G DKE E+Y D + S
Sbjct: 77 DLYHDNHERKMSAQSCACMVRTLL--YGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGS 133
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 39.5 bits (88), Expect = 3e-04
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Frame = +3
Query: 72 LGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNI 251
LGI D +++AA++ + ++ ++ +K+Y I D ++ V G D Y +
Sbjct: 35 LGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVG 94
Query: 252 QLYKMRNGYELGPTAAANFT---RRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYL 422
Q Y E+ ++ +Y P+ V+ L G+D G +L+ +
Sbjct: 95 QQYLQTFNEEMPCEQLVRRVCDLKQGYTQY-GGLRPFGVSFLYAGWDHIRGYQLFQSN-- 151
Query: 423 ASSVKVPFAAHGYGGYLS--LSIMDRYHKKDATEDES 527
S + A+ GG + S+M + +K D DE+
Sbjct: 152 PSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEA 188
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 34.3 bits (75), Expect = 0.013
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 8/160 (5%)
Frame = +3
Query: 72 LGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNI 251
+G++ D V++ ++ + +M E K+++I + + G D E+
Sbjct: 38 IGVKTKDAVVLGVEKRLTSPLMESHSVE-KLFEIDSHIGCAISGLTADARTIIEHARVQT 96
Query: 252 Q----LYKMRNGYELGPTA----AANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELY 407
Q Y G E + A F E S P+ V +L+ G D E+GP+LY
Sbjct: 97 QNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGID-EHGPQLY 155
Query: 408 FMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKDATEDES 527
+ + + A G G + S + + KD T +E+
Sbjct: 156 HSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEA 195
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 29.1 bits (62), Expect = 0.47
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 311 SEISRCRWSQFIPVTHFIQL-YILSNVFRKLSGISQIT 201
S +++ RW+QF P+T+ + L Y++ + K + S +T
Sbjct: 399 SRVTKGRWAQFFPITNVLWLHYLIHQLLHKKNLSSPLT 436
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 27.5 bits (58), Expect = 1.4
Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Frame = +3
Query: 57 NLQCLLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEY 236
N +GI+C D V++A ++ + ++ + + ++I + + + G + D +
Sbjct: 32 NASTCIGIKCEDGVILALEKVVTSKLLKPRVN-NRIGSVDRHIGIATTGFIPDGQHIVKR 90
Query: 237 IAKNIQLYKMRNGYELGPTAAANFTRR--NLAEYLRSSTPYFVNILMGGYDKENGPELYF 410
++ G + T A+ L S P+ V + YD E GP LY
Sbjct: 91 ARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSE-GPHLYM 149
Query: 411 MD 416
++
Sbjct: 150 VE 151
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 33 ISGNMSNINLQCLLGIQCNDFVMIAADQSTSHSIMVMKDDED 158
IS +N + LLG+ N +++A + V + DED
Sbjct: 461 ISTYAEGLNFKSLLGLSGNQVLLLADGTNNCSKFFVFQCDED 502
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 464 WLPQLEHHGPLSQKRCYRRRKH 529
WLP HH +S RC R+ H
Sbjct: 121 WLPDRSHHSRVSM-RCIRKFDH 141
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,600,309
Number of Sequences: 5004
Number of extensions: 58374
Number of successful extensions: 171
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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