Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_F09
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta... 130 5e-31
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 59 2e-09
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 52 3e-07
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 52 3e-07
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 41 5e-04
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 33 0.14
U64848-12|AAY86244.1| 231|Caenorhabditis elegans Hypothetical p... 31 0.57
Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical pr... 28 5.3
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 7.0
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 7.0
U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 7.0
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 7.0
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 7.0
>U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta
subunit protein 4 protein.
Length = 202
Score = 130 bits (315), Expect = 5e-31
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 3/157 (1%)
Frame = +3
Query: 69 LLGIQCNDFVMIAADQSTSHSIMVMKDDE-DKIYKISDRLVMGVIGDLGDTTQFAEYIAK 245
L+GI ++V++AAD++T ++ D E DK Y++ +L M IG+ GD QF ++ +
Sbjct: 7 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKR 66
Query: 246 NIQLYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGY-DKENGPELYFMDYL 422
N+QLY +RNGYE+ P+ A +F RR++AE LRS Y V++L+GGY DKE+ L +DYL
Sbjct: 67 NLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYL 126
Query: 423 ASSV-KVPFAAHGYGGYLSLSIMDRYHKKDATEDESI 530
A+ + + P+ G+ G +IMDR +KKD TE E +
Sbjct: 127 ANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGL 163
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 63.3 bits (147), Expect = 1e-10
Identities = 40/144 (27%), Positives = 74/144 (51%)
Frame = +3
Query: 96 VMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQLYKMRNG 275
VM A ++T+ +I+ K E K++K+++ + G D Q + ++ N++L ++ G
Sbjct: 59 VMGADSRATAGNIIADKHCE-KVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTG 117
Query: 276 YELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLASSVKVPFAAH 455
+ A +++L Y Y +L+GG D GP LY +++ PF A
Sbjct: 118 RKARVITALRQAKQHLFNYQGYIGAY---LLIGGVDP-TGPHLYMCSANGTTMAFPFTAQ 173
Query: 456 GYGGYLSLSIMDRYHKKDATEDES 527
G G Y +++I++R K D T+DE+
Sbjct: 174 GSGSYAAITILERDFKVDMTKDEA 197
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 59.3 bits (137), Expect = 2e-09
Identities = 36/144 (25%), Positives = 66/144 (45%)
Frame = +3
Query: 96 VMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQLYKMRNG 275
+++A D S + KI I DR+V + G D + +AK LY++R
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 276 YELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLASSVKVPFAAH 455
+ +AA+ + L Y V ++ GYDK+ GP+++ +D ++ +
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLS--VGSMVAGYDKK-GPQIFKVDSEGDRCQLKVCSV 199
Query: 456 GYGGYLSLSIMDRYHKKDATEDES 527
G G + I+D ++K T+DE+
Sbjct: 200 GSGSLNAYGILDNHYKPKMTDDEA 223
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 78 IQCNDFVMIAAD-QSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQ 254
I +F ++A+D + T + I ++ D +KI ++D +++ G GD Q + + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 255 LYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLASSV 434
Y+ ++ A RNL Y R PY+ ++ G D+ ++ D +
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNL--YYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIE 174
Query: 435 KVPFAAHGYGGYLSLSIMD 491
++ ++A G + + +D
Sbjct: 175 RLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 78 IQCNDFVMIAAD-QSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQ 254
I +F ++A+D + T + I ++ D +KI ++D +++ G GD Q + + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 255 LYKMRNGYELGPTAAANFTRRNLAEYLRSSTPYFVNILMGGYDKENGPELYFMDYLASSV 434
Y+ ++ A RNL Y R PY+ ++ G D+ ++ D +
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNL--YYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIE 174
Query: 435 KVPFAAHGYGGYLSLSIMD 491
++ ++A G + + +D
Sbjct: 175 RLGYSASGAAEPMIIPFLD 193
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 41.1 bits (92), Expect = 5e-04
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +3
Query: 72 LGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNI 251
LGI ++ +++AA++ H ++ +K+Y++SD + V G D ++
Sbjct: 35 LGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWA 94
Query: 252 QLYKMRNGYELGPTAAANFTRRNLAEY--LRSSTPYFVNILMGGYDKENGPELYFMD 416
Y+ G E+ Y + P+ V++L G+DK G +LY D
Sbjct: 95 ASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSD 151
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 33.1 bits (72), Expect = 0.14
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 90 DFVMIAADQSTSHSIMVMKDDEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQLYKMR 269
D +IA + S++V D +Y+IS + IG + D + +K +
Sbjct: 46 DAAVIAVQKRVPDSLIVA-DTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYK 104
Query: 270 NGYELGPTAAANFTRRNLAEYLRSSTPYF---VNILMGGYDKENGPELYFMD 416
NGY++ P +L +Y + +L YD E GPE+Y +D
Sbjct: 105 NGYDM-PCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVD 155
>U64848-12|AAY86244.1| 231|Caenorhabditis elegans Hypothetical
protein C50E3.14 protein.
Length = 231
Score = 31.1 bits (67), Expect = 0.57
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 443 FCCSWIWWLPQLEHHGPLSQKRCY 514
FCC++++ P +++HG + CY
Sbjct: 191 FCCAYVYITPNVQYHGMVDDTMCY 214
>Z81139-3|CAB03482.1| 520|Caenorhabditis elegans Hypothetical
protein W05H5.3 protein.
Length = 520
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 231 PQTEWYLPNHQSLPSPTYQKSYRFYPHH 148
P ++Y PN + P PT + Y+ +PH+
Sbjct: 8 PPFQYYAPNPVAPPIPTLDEKYKPFPHY 35
>Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical
protein F11C1.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 4.0
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = +3
Query: 186 VMGVIGDLGDTTQFAEYIAKNIQLYKMRNGYELGPTAAANFTRRN---LAEYLRSSTPYF 356
V+G G+ G T F + +N+ + R G + N L LR S +
Sbjct: 24 VLGNPGNDGFYTDFGRRLIRNLIAREERLGTRRVQFVFYTLSHLNHVLLPTSLRCSESHK 83
Query: 357 VNILMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 509
VN D+ + +YL +V HG G Y+ LSI+ Y K D
Sbjct: 84 VNERFSLADQVQHKLDFVKEYLPRGNRVYMFGHGDGAYMLLSILP-YIKDD 133
>Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical
protein T02C12.2 protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +3
Query: 3 SVCFSFYCIKISGNMSNINLQCLLGIQCNDFVMIAADQSTSHSIMVMKDDEDKIYKISDR 182
S+ + Y + N S + QC + +C D +++ D ++ ++ + +
Sbjct: 138 SLKYDKYMLNAGANTSLFHPQCSILEKCEDDIVLIVDALMPYNRELLSSELRSSRLLKPM 197
Query: 183 LVMGVIGD--LGDTTQFAEYIAKNIQLYKMRNGYELGPTAAANFT 311
V GD L D Q +++ ++ + + NG EL P N T
Sbjct: 198 TKFLVRGDTLLSDLRQ--KFVCQSDTIVPLENGLELDPPNLDNAT 240
>Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical
protein F07B10.4 protein.
Length = 724
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 557 SCTHFFKMSYAFVFCSIFFVITVHDAQAEVTTISMSSKRY 438
+C+ ++ FV CSI + +H A+ T+S+ ++RY
Sbjct: 213 ACSTTVLFAFVFVLCSITTIAIIHSAK---DTMSLQTRRY 249
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 150 DEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQL 257
D++K++ IS+RLV+ +LG++ + KN+QL
Sbjct: 1486 DDEKLW-ISERLVLAKAQNLGESLPDCHRLQKNLQL 1520
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 150 DEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQL 257
D++K++ IS+RLV+ +LG++ + KN+QL
Sbjct: 1486 DDEKLW-ISERLVLAKAQNLGESLPDCHRLQKNLQL 1520
>U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical
protein K02G10.1 protein.
Length = 281
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 437 STFCCSWIWWLPQLEHHGPLSQKRCYRRRKHMTF*RSVC 553
S FC + PQ HH PL K C R+ H F C
Sbjct: 130 SKFCFTCNKEAPQRSHHCPLC-KMCVLRKDHHCFITGAC 167
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 150 DEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQL 257
D++K++ IS+RLV+ +LG++ + KN+QL
Sbjct: 1486 DDEKLW-ISERLVLAKAQNLGESLPDCHRLQKNLQL 1520
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 150 DEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQL 257
D++K++ IS+RLV+ +LG++ + KN+QL
Sbjct: 1486 DDEKLW-ISERLVLAKAQNLGESLPDCHRLQKNLQL 1520
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 150 DEDKIYKISDRLVMGVIGDLGDTTQFAEYIAKNIQL 257
D++K++ IS+RLV+ +LG++ + KN+QL
Sbjct: 1486 DDEKLW-ISERLVLAKAQNLGESLPDCHRLQKNLQL 1520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,339,707
Number of Sequences: 27780
Number of extensions: 323300
Number of successful extensions: 854
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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