Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_F05
         (180 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071736-1|AAL49358.1|   48|Drosophila melanogaster RH45340p pro...    29   0.86 
AY071289-1|AAL48911.1|   48|Drosophila melanogaster RE31692p pro...    29   0.86 
AE014298-1455|AAF46590.1|   48|Drosophila melanogaster CG15304-P...    29   0.86 

>AY071736-1|AAL49358.1|   48|Drosophila melanogaster RH45340p
           protein.
          Length = 48

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 79  TESG-AYTGQANYAVCGALILYFTLRPKK 162
           T SG A   +A YAV G LI Y  L+PKK
Sbjct: 19  TMSGRANVAKATYAVMGLLIAYQVLKPKK 47


>AY071289-1|AAL48911.1|   48|Drosophila melanogaster RE31692p
           protein.
          Length = 48

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 79  TESG-AYTGQANYAVCGALILYFTLRPKK 162
           T SG A   +A YAV G LI Y  L+PKK
Sbjct: 19  TMSGRANVAKATYAVMGLLIAYQVLKPKK 47


>AE014298-1455|AAF46590.1|   48|Drosophila melanogaster CG15304-PA
           protein.
          Length = 48

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 79  TESG-AYTGQANYAVCGALILYFTLRPKK 162
           T SG A   +A YAV G LI Y  L+PKK
Sbjct: 19  TMSGRANVAKATYAVMGLLIAYQVLKPKK 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,775,881
Number of Sequences: 53049
Number of extensions: 140578
Number of successful extensions: 288
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 288
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)