Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E24
         (416 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    26   0.20 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    26   0.20 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    26   0.20 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    26   0.20 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   3.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   7.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   9.7  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 130 RTTKEDAGFRSYRSDWKPLSGEETKTRYSKCP 225
           ++ K +  +R YR  WK  S + T+   S+ P
Sbjct: 48  KSYKNENSYRKYRETWKERSRDRTERERSREP 79


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 130 RTTKEDAGFRSYRSDWKPLSGEETKTRYSKCP 225
           ++ K +  +R YR  WK  S + T+   S+ P
Sbjct: 48  KSYKNENSYRKYRETWKERSRDRTERERSREP 79


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 130 RTTKEDAGFRSYRSDWKPLSGEETKTRYSKCP 225
           ++ K +  +R YR  WK  S + T+   S+ P
Sbjct: 48  KSYKNENSYRKYRETWKERSRDRTERERSREP 79


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 130 RTTKEDAGFRSYRSDWKPLSGEETKTRYSKCP 225
           ++ K +  +R YR  WK  S + T+   S+ P
Sbjct: 48  KSYKNENSYRKYRETWKERSRDRTERERSREP 79


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +3

Query: 195 RDQNAIQQMPKLNKIATRPRRTINKKDNKIIMHKRNHKITMHNK 326
           R+ +  +   +  +  +R  + I+   NK I +  N+K   +NK
Sbjct: 60  RETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNK 103


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 12  EADSSLWNADDGGNEGISTDVRNGSNMLKRFRRSPPVCCTY 134
           ++D S   +DDGG   +   V    +    FR +  + C Y
Sbjct: 434 KSDMSNMQSDDGGPLSLKNKVETTHSGTSLFRINLGIECGY 474


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 226 LGICCIAFWS 197
           L + C+AFWS
Sbjct: 388 LTVVCLAFWS 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,751
Number of Sequences: 438
Number of extensions: 1274
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)