Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E23
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   4.0  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   4.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.0  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.3  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.3  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -2

Query: 335 SQHVYQQPSSL-----DLRMPVHRCQHRNCIQCRPS 243
           ++H+++  SS      DL  P+   QH NC+   PS
Sbjct: 270 ARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPS 305


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 389 LPPEKQLSTSKSLIAQGVQLGVISSEYKLIGHN 487
           +PPE   +  KSL   GV++G+   +Y  I  N
Sbjct: 154 IPPELP-NDEKSLFENGVEIGINFDKYDNIQVN 185


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 360 IPTLWLLAFPACIP 319
           + T+W+L+F  C P
Sbjct: 186 VATVWILSFVICFP 199


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 347 GCWRSQHVYQ 318
           GCW S+H ++
Sbjct: 331 GCWNSEHFFE 340


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 219 ILCMS*MHWSV 187
           ILCMS +HW +
Sbjct: 295 ILCMSDLHWQL 305


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 387 SSRQSPIKQIPTLWLLAFPACIP 319
           S  + PI+ I   WL+A  + IP
Sbjct: 153 SGLKRPIRFILAAWLIALISAIP 175


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 223 LHTLHVLNALVGGITGS 173
           +H LH +  ++GGI G+
Sbjct: 331 VHNLHGMPGILGGIFGA 347


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 369 IKQIPTLWLLAFPACIPTTFQ 307
           +K I  +WLLA    +P   Q
Sbjct: 172 VKFIIVIWLLALCLAVPQAIQ 192


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 208 HAEYAKLSQQHKLGRHWIQFL 270
           HAEY+ L     L RH   FL
Sbjct: 197 HAEYSMLLVYFHLQRHMGNFL 217


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = -2

Query: 443 VLPVR*EICSLITAFLEEGHLANHRSSKYRRSGCWRS 333
           +LP R E+     + ++E  L           GCW S
Sbjct: 307 ILPERGELGHCTASVMDENGLQFFNLIDQNAVGCWNS 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,929
Number of Sequences: 438
Number of extensions: 3665
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)