Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_E19
(381 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence si... 34 0.13
BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence si... 34 0.13
BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence si... 34 0.13
BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence si... 34 0.13
AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein. 34 0.13
AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens ... 34 0.13
BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein. 30 2.2
BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein. 30 2.2
AK126839-1|BAC86716.1| 190|Homo sapiens protein ( Homo sapiens ... 29 3.8
BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for MG... 29 5.0
BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for MG... 29 5.0
AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette, s... 29 5.0
AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette, s... 29 5.0
AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette, s... 29 5.0
AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens ... 29 5.0
AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette tr... 29 5.0
AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1 ... 29 5.0
AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette tr... 29 5.0
AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein. 29 5.0
AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding tr... 29 5.0
AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein. 29 5.0
AL022341-2|CAC79469.1| 754|Homo sapiens protein ( Human DNA seq... 29 6.6
AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens ... 29 6.6
AE006464-7|AAK61239.1| 705|Homo sapiens Hypothetical protein pr... 29 6.6
>BC025998-1|AAH25998.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025409-1|AAH25409.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC025397-1|AAH25397.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC022035-1|AAH22035.1| 605|Homo sapiens family with sequence
similarity 71, member B protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AY973323-1|AAY41236.1| 605|Homo sapiens HSD-51 protein.
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>AK057543-1|BAB71526.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ32981 fis, clone TESTI3000002, weakly similar to
L.mexicana lmsap2 gene for secreted acid phosphatase 2
(SAP2). ).
Length = 605
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 NSRVRRQAGALTINSDGTSGAIVKVPITGNENHKLSALGSVDLTNQMKLGAATAG 309
N + AGA I+S+G S A+V T E S G+ L+ L AA AG
Sbjct: 324 NESSKSMAGAANISSEGISLALVGAASTSLEGTSTSMAGAASLSQDSSLSAAFAG 378
>BC121186-1|AAI21187.1| 729|Homo sapiens WDR90 protein protein.
Length = 729
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 160 GAPWSCPTAPADHHTVRCSSQALQRARTGC 71
GA SCP +HH ++ + A ++AR GC
Sbjct: 536 GALRSCPVDLGEHHALQFTDLAFKQARDGC 565
>BC121185-1|AAI21186.1| 730|Homo sapiens WDR90 protein protein.
Length = 730
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 160 GAPWSCPTAPADHHTVRCSSQALQRARTGC 71
GA SCP +HH ++ + A ++AR GC
Sbjct: 537 GALRSCPVDLGEHHALQFTDLAFKQARDGC 566
>AK126839-1|BAC86716.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ44891 fis, clone BRAMY2044686. ).
Length = 190
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 239 FSLPVIGTLTIAPEVPSELIVRAPAC 162
FSLPVI + P +P + V PAC
Sbjct: 123 FSLPVISGAGLCPSIPVSISVLGPAC 148
>BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for
MGC:165011) protein.
Length = 272
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for
MGC:164864) protein.
Length = 272
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberisiae) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 363
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14266 fis, clone PLACE1002437, highly similar to
ATP-BINDING CASSETTE TRANSPORTER 1. ).
Length = 363
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette
transporter-1 (ABC-1) protein.
Length = 2201
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1
sub-family A member 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette
transporter 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding
transporter 1 protein.
Length = 2201
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 327 DIVVCQSSCSGSQLHLVSEINGAKSTELV 241
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL022341-2|CAC79469.1| 754|Homo sapiens protein ( Human DNA
sequence from clone LA16c-349E10 on chromosome 16
Contains(part of) three novel genes, ESTs, STSs, GSSs
and four CpG islands. leukoencnovel protein).
Length = 754
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 148 SCPTAPADHHTVRCSSQALQRARTGC 71
SCP +HH ++ + A ++AR GC
Sbjct: 540 SCPVDLGEHHALQFTDLAFKQARDGC 565
>AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens
cDNA FLJ44660 fis, clone BRACE3002344, weakly similar
to Vegetatible incompatibility protein HET-E-1. ).
Length = 1060
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 148 SCPTAPADHHTVRCSSQALQRARTGC 71
SCP +HH ++ + A ++AR GC
Sbjct: 67 SCPVDLGEHHALQFTDLAFKQARDGC 92
>AE006464-7|AAK61239.1| 705|Homo sapiens Hypothetical protein
protein.
Length = 705
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 148 SCPTAPADHHTVRCSSQALQRARTGC 71
SCP +HH ++ + A ++AR GC
Sbjct: 590 SCPVDLGEHHALQFTDLAFKQARDGC 615
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,263,534
Number of Sequences: 237096
Number of extensions: 1194386
Number of successful extensions: 3115
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3114
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -