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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E17
         (331 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...   104   4e-24
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    50   1e-07
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    41   4e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    33   0.015
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    32   0.020
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    29   0.18 
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    29   0.18 
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    29   0.24 
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe...    28   0.32 
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo...    28   0.42 
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo...    27   0.56 
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz...    27   0.56 
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    26   1.7  
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb...    25   2.2  
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch...    25   2.2  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    25   3.9  
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    25   3.9  
SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces pombe...    25   3.9  
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa...    24   5.2  
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    24   6.8  
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces...    24   6.8  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    24   6.8  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    24   6.8  
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo...    24   6.8  
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch...    23   9.0  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  104 bits (249), Expect = 4e-24
 Identities = 54/111 (48%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   VKLLLQVQHVSKQIAE-DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 177
           VKLL+Q Q    +      RYKGI + F R   E+G++S WRGN ANV+RYFPTQALNFA
Sbjct: 51  VKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFA 110

Query: 178 FKDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 330
           FKDK+K++F G   +   + ++F             SL FVY LD+ARTRL
Sbjct: 111 FKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRL 160



 Score = 30.3 bits (65), Expect = 0.079
 Identities = 24/94 (25%), Positives = 37/94 (39%)
 Frame = +1

Query: 49  DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 228
           ++++ G+VD + +  +  GL   +RG   +V+     + L F   D  K V L G     
Sbjct: 172 ERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEG 230

Query: 229 QFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 330
            F   F             S    YPLD  R R+
Sbjct: 231 NFLASFLLGWAVTTGSGVAS----YPLDTIRRRM 260


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
 Frame = +1

Query: 37  QIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGV 216
           Q+  ++ Y  +    V+I   +GL+ F+RGN  N +R FP  A+ FA  +  KQ  L   
Sbjct: 49  QVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRAL--- 105

Query: 217 DKNTQFWRYFXXXXXXXXXXXXTSLC-FVYPLDFARTRL 330
            KN                    + C   YPLD ARTRL
Sbjct: 106 -KNRSHQNLENHERLLFGAIAGAASCATTYPLDIARTRL 143



 Score = 30.3 bits (65), Expect = 0.079
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 58  YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 174
           YK I  A   I K +G+  F+RG  +N+++  P  ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 29/110 (26%), Positives = 47/110 (42%)
 Frame = +1

Query: 1   VKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAF 180
           VK+L Q  H S +     R+ G+  A   I    GL   ++G+ A + R FP   + F  
Sbjct: 41  VKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVA 99

Query: 181 KDKYKQVFLGGVDKNTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 330
            ++ ++V +   +  T   R+              S+ F YPL+  R RL
Sbjct: 100 YEQVRRVLIRDPEHETHARRFLSGSLAGT-----CSVFFTYPLELIRVRL 144


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 32.7 bits (71), Expect = 0.015
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = +1

Query: 1   VKLLLQVQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAF 180
           ++  LQ Q  S   A    Y G +D F +  K +G    ++G   N+++  P+ A+++  
Sbjct: 359 IRTRLQTQGTS---AHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLV 415

Query: 181 KDKYKQ 198
            +  K+
Sbjct: 416 YENCKK 421



 Score = 23.4 bits (48), Expect = 9.0
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +1

Query: 94  KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 210
           K  G+  ++RG    ++  FP  A +    +  K+ ++G
Sbjct: 280 KSVGIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 32.3 bits (70), Expect = 0.020
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 58  YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 204
           Y G  D   +I K +G    +RG    ++   P +AL FA  D Y +++
Sbjct: 45  YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93



 Score = 28.7 bits (61), Expect = 0.24
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 34  KQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 195
           + +    +Y G VD F +I K++ +L+ + G  A + R+    A  F    K +
Sbjct: 133 QDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIR 186


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 31  SKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 174
           S  I    +Y G++  F  +  EQG++  + G  A+++R  P   + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 23/91 (25%), Positives = 34/91 (37%)
 Frame = +1

Query: 58  YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFW 237
           Y    DAF +I K +GL +F+RG F ++        + F   + +K        K + F 
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGKKSNFH 288

Query: 238 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRL 330
                          T     YP +  RTRL
Sbjct: 289 IVLAATLSKIAASTVT-----YPHEVLRTRL 314



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = +1

Query: 64  GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 222
           G + +   I   +G+   +RG    ++ Y P+ ++ F   +K K +F  GV+K
Sbjct: 53  GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNK 103


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 20/93 (21%), Positives = 29/93 (31%)
 Frame = +2

Query: 53  NATRVSSTPSSAFPRSRVCSHSGVVTSPMXXXXXXXXXXXXXXXXXXXXXXXVVLTRTRS 232
           +++ VSST SS+   S   S +   TSP                           + + S
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187

Query: 233 SGVTSLVTXXXXXXXXXXXXXXCTRSTSPVHVS 331
           S  +S  +               T STS  H S
Sbjct: 188 SSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSS 220


>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 317

 Score = 28.3 bits (60), Expect = 0.32
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +2

Query: 2   SNCCSKSSTSANRSPRTNATRVSSTPSSAFPRS 100
           S+  SKSS+S++ S +++++  SS+ SSA P S
Sbjct: 182 SSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSS 214


>SPAC19G12.05 |||mitochondrial citrate
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 291

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +1

Query: 34  KQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 201
           + ++  + YK  +    +I  + GLL FW G    + R   +  + F   +K  ++
Sbjct: 232 QSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287


>SPCC126.09 |||vacuolar membrane zinc transporter
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 418

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNATRVSSTPSSAFPRSRV 106
           S S+   +RSP  +  R+SS  SS  P SRV
Sbjct: 160 SPSTAQNHRSPPASCKRLSSCESSGSPSSRV 190


>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1273

 Score = 27.5 bits (58), Expect = 0.56
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 44  PRTNATRVSSTPSSAFPRSRVCSHSGVVTSP 136
           P T A  V S P+S+FP     + SG ++SP
Sbjct: 310 PPTTAPAVVSPPASSFPLMSSAATSGNISSP 340


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 6/116 (5%)
 Frame = +2

Query: 2   SNCCSKSSTSANRSPRTNATRVSSTPSSAFPRSRVCSH---SGVV---TSPMXXXXXXXX 163
           S   S SS++++  P  ++T  SST SSA P S   S+   S VV   +SP         
Sbjct: 173 STFSSLSSSTSSSQPSVSSTS-SSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLT 231

Query: 164 XXXXXXXXXXXXXXXVVLTRTRSSGVTSLVTXXXXXXXXXXXXXXCTRSTSPVHVS 331
                             T +  S  +S  T               + S+SP   S
Sbjct: 232 SSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTS 287


>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 710

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
 Frame = +1

Query: 61  KGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKNT 228
           K + D  +      G + FW G F  + + F      AL          VF  G+D+ T
Sbjct: 212 KSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270


>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 271

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 67  IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 159
           +++    + + +GL  F+RG +  V  Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNATRVSSTPSSAFPRSRVCSHSGVVTSPMXXXXXXXXXX---XXXXX 184
           S SST  + +  T AT  SSTP S+   +   S S    S +                  
Sbjct: 419 SVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNS 478

Query: 185 XXXXXXXXVVLTRTRSSGVTS 247
                     LT   S+  TS
Sbjct: 479 TTATSASSTPLTSVNSTSATS 499



 Score = 24.2 bits (50), Expect = 5.2
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNA-----TRVSSTPSSAFPRSRVCSHSGVVTSPM 139
           S S+TSA+ +P T+A     T VSST  S +  S V   S V ++P+
Sbjct: 380 STSATSASSTPLTSANSTTSTSVSSTAPS-YNTSSVLPTSSVSSTPL 425



 Score = 24.2 bits (50), Expect = 5.2
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNA-----TRVSSTPSSAFPRSRVCSHSGVVTSPM 139
           S S+TSA+ +P T+A     T VSST  S +  S V   S V ++P+
Sbjct: 494 STSATSASSTPLTSANSTTSTSVSSTAPS-YNTSSVLPTSSVSSTPL 539


>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 230

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 2   SNCCSKSSTSANRSPRTNATRVSSTPSSAFPRSRVCSHSGVVTS 133
           S+  S  STS +  P T+++  SST +S+   + V + S V  S
Sbjct: 57  SSSSSSISTSHDSQPSTSSSSPSSTSTSSSSGTSVITASDVSAS 100


>SPBC16D10.06 |||ZIP zinc transporter 2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 408

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 53  WSSAICLLTCW 21
           W+  ICL++CW
Sbjct: 141 WAPGICLISCW 151


>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 244

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 144 QVLPDSGAQLRFQGQVQAG 200
           + LPD   +LRF+G+ + G
Sbjct: 211 RTLPDGSCKLRFEGEEEVG 229


>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 536

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 2   SNCCSKSSTSANRSPRTNATRVSSTPSSAFPRSRVCSHS 118
           S+    SS+SA+ +  ++AT  SS  SSA P S   SH+
Sbjct: 86  SSSQQSSSSSASLTSSSSATLTSS--SSASPTSSSSSHA 122


>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 693

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 19  VQHVSKQIAEDQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF-AFKDKYK 195
           V  + K    D+RY GI   F+ + KE  +        A+ IR      L+F + + +Y 
Sbjct: 80  VDCILKDEEYDKRYPGIHIVFLDMVKEPLINKLRTSRIASKIRTVQVAYLDFTSLESRYF 139

Query: 196 QV 201
           QV
Sbjct: 140 QV 141


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNATRVSSTPSS 85
           S+ STS+N S R N     S PSS
Sbjct: 790 SQKSTSSNTSNRNNGGYSGSRPSS 813


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 14  SKSSTSANRSPRTNATRVS 70
           S SST+A+ SP TNA+  +
Sbjct: 62  SSSSTAADTSPSTNASNTN 80


>SPBC1604.04 |||thiamine pyrophosphate
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 314

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 79  FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 201
           F    +++G+ + WRGN    + Y    A  F    K K +
Sbjct: 55  FKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHL 95



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 58  YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 156
           YK   D F+ I +  G+   +RG   ++++  P
Sbjct: 227 YKSFKDCFLSIYRNSGIKGLYRGLSVSMLKVAP 259


>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 297

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 2   SNCCSKSSTSANRSPRTNATRVSSTPSSAFP 94
           S+CCSK  +S +  P   +    S  SS  P
Sbjct: 223 SSCCSKKDSSPSEKPSCCSQEKKSCCSSKKP 253


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,111,746
Number of Sequences: 5004
Number of extensions: 18273
Number of successful extensions: 104
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 91899990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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