Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_E15
(553 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens ... 31 2.7
Z49216-1|CAA89153.1| 478|Homo sapiens orf protein. 29 8.2
X94754-1|CAA64381.1| 900|Homo sapiens yeast methionyl-tRNA synt... 29 8.2
D84224-1|BAA95668.1| 900|Homo sapiens methionyl tRNA synthetase... 29 8.2
BT007338-1|AAP36002.1| 900|Homo sapiens methionine-tRNA synthet... 29 8.2
BC015011-1|AAH15011.1| 899|Homo sapiens MARS protein protein. 29 8.2
BC011849-1|AAH11849.1| 900|Homo sapiens methionyl-tRNA syntheta... 29 8.2
BC011639-1|AAH11639.1| 900|Homo sapiens methionyl-tRNA syntheta... 29 8.2
BC006328-1|AAH06328.1| 900|Homo sapiens methionyl-tRNA syntheta... 29 8.2
BC002384-1|AAH02384.1| 900|Homo sapiens methionyl-tRNA syntheta... 29 8.2
AK222767-1|BAD96487.1| 900|Homo sapiens methionine-tRNA synthet... 29 8.2
>AK130508-1|BAC85367.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ26998 fis, clone SLV04689. ).
Length = 121
Score = 31.1 bits (67), Expect = 2.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 295 WFRHTASGSGRRCEPTATI-FIVKARCCPG 381
WF H GSG R +P+ + F + CCPG
Sbjct: 34 WFPHQFRGSGARAQPSWFLCFRLSPGCCPG 63
>Z49216-1|CAA89153.1| 478|Homo sapiens orf protein.
Length = 478
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 301 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 347
>X94754-1|CAA64381.1| 900|Homo sapiens yeast methionyl-tRNA
synthetase homolog protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>D84224-1|BAA95668.1| 900|Homo sapiens methionyl tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>BT007338-1|AAP36002.1| 900|Homo sapiens methionine-tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>BC015011-1|AAH15011.1| 899|Homo sapiens MARS protein protein.
Length = 899
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 722 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 768
>BC011849-1|AAH11849.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>BC011639-1|AAH11639.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>BC006328-1|AAH06328.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>BC002384-1|AAH02384.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
>AK222767-1|BAD96487.1| 900|Homo sapiens methionine-tRNA synthetase
variant protein.
Length = 900
Score = 29.5 bits (63), Expect = 8.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 198 EEWIFIKKSRYFKYTLGSLPSLSLKIFRQLSVMVSPHSERVGSSLRA 338
E W IK S + G++ L++ I LSVM+ P+ V ++++A
Sbjct: 723 EPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQA 769
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,232,306
Number of Sequences: 237096
Number of extensions: 1334120
Number of successful extensions: 5469
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5469
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -