Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_E14
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 27 2.2
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 2.9
SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyc... 26 3.9
SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|c... 26 3.9
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 26 3.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 5.1
SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr 3... 25 5.1
SPBC1289.09 |tim21||mitochondrial inner membrane presequence tra... 25 6.8
SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr 1|... 25 9.0
SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces pomb... 25 9.0
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 187 LKNYTFIDESHNELLSSHYAIENQNIVDVE 276
LKN F + H +H EN+N +DVE
Sbjct: 719 LKNMNFFNTMHMPSTPAHKRPENKNQIDVE 748
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 2.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 301 LRLNKPQKDLVSFGIW--GRLFSRDVDHNKHITEEDKQKFVDILNIIYGND 447
L L + QK V+ + RL + +H++ T+E Q+ +D+L + GN+
Sbjct: 897 LALAESQKQGVNLEVQTLDRLLQKVKEHSEDNTKEKHQQLLDLLESLVGNN 947
>SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1088
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 148 FPLSVRDNKFPLGLKNY-TFIDESHNELLSSHYAIENQNIVDVEN 279
+P+ + + P G NY T +D NEL SS YA +I D+EN
Sbjct: 14 YPVGKKSLESPNGYSNYGTSMD---NEL-SSEYASRGMHIGDLEN 54
>SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 186
Score = 25.8 bits (54), Expect = 3.9
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 70 IQDLEIEMTTYRIQYNTTLECD-NIVYFPLSVRDNKFPLGLKNYTFIDESHNELLSSHYA 246
+QDL + + YR + L+ +V FP S+ + GL Y FI ++ LLSS Y
Sbjct: 49 LQDL-VPLVLYRALPDAILDHHVELVIFPNSLNFPRIE-GLTIYKFIFKTARLLLSSTYG 106
Query: 247 IENQNIVDV 273
+ +D+
Sbjct: 107 SSAKRPIDI 115
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 3.9
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +1
Query: 16 NEFKSCGYRYDEKLVNNEIQDLEIEMTTYRIQYNTTLECDNIVYFPLSVRDNKFPLGLKN 195
N SCG D L + ++ +E R+ N L CD SV+ + LG+K
Sbjct: 256 NSASSCGKELDTCLCLHAEENALLEAGRERVGNNAILYCDTCPCLTCSVKITQ--LGIKE 313
Query: 196 YTFIDESHNELLSSHYA 246
+ S+N + SH A
Sbjct: 314 VVY-HTSYN--MDSHTA 327
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 10 KDNEFKSCGYRYDEKLVNNEIQDLEIEMTTYRIQYNTTL 126
K + K+ Y E L+ + + DL+ + T+ QYN +L
Sbjct: 901 KFTQQKNTSYSEREALLESSLSDLQSKHTSLESQYNYSL 939
>SPCC16A11.03c |||DUF2009 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 300 NDPHTTFVFYVNDILVFDSVM*TEKLIMAFINKRIILET*RKLVISD 160
N H T FYV+ LVF S M + ++ + +L+ + ISD
Sbjct: 267 NHDHKTQFFYVDQSLVFWSCMMDQMFLLWLESDASLLDKHSRYFISD 313
>SPBC1289.09 |tim21||mitochondrial inner membrane presequence
translocase complex subunit Tim21 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 265 VDVENESRMRIILRLNKPQKDLVSFGIWGRL 357
VDV N ++ I N ++ +FG+WG L
Sbjct: 186 VDVANYGKIIIFDHTNSVRQQHKNFGLWGSL 216
>SPAC25H1.02 |jmj1||Jmj1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 464
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 13 DNEFKSCGYRYDEKLVNNEIQDLEIEMTTYRIQYNTTLECDNIVYFPLSVRDNK 174
DN+ K+ Y E++VNNE +++ ++ Y E + PL+ + K
Sbjct: 88 DNDIKNFIRSYAERIVNNEDKNVFLDSLLLSPNYEYLEENYGTIPVPLAYCNEK 141
>SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 4 ACKDNEFKSCGYRYDEKLVN 63
AC DN CGY E L N
Sbjct: 54 ACGDNRKGQCGYEVKEPLYN 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,989,468
Number of Sequences: 5004
Number of extensions: 39462
Number of successful extensions: 128
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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