Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E14
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL137607-1|CAB70839.1|  825|Homo sapiens hypothetical protein pr...    34   0.26 
AF109219-1|AAD11432.1|  931|Homo sapiens Mcd4p homolog protein.        34   0.26 
BC028363-1|AAH28363.1|  931|Homo sapiens phosphatidylinositol gl...    31   3.2  

>AL137607-1|CAB70839.1|  825|Homo sapiens hypothetical protein
           protein.
          Length = 825

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 22/71 (30%), Positives = 34/71 (47%)
 Frame = +1

Query: 238 HYAIENQNIVDVENESRMRIILRLNKPQKDLVSFGIWGRLFSRDVDHNKHITEEDKQKFV 417
           H+A  NQ++    NE ++   L L      + + G   R  SRD  HN    ++  ++ V
Sbjct: 81  HHARNNQSLFSKINEEKIVFFLHL----LGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIV 136

Query: 418 DILNIIYGNDG 450
            + N  YGNDG
Sbjct: 137 SMFNHFYGNDG 147


>AF109219-1|AAD11432.1|  931|Homo sapiens Mcd4p homolog protein.
          Length = 931

 Score = 34.3 bits (75), Expect = 0.26
 Identities = 22/71 (30%), Positives = 34/71 (47%)
 Frame = +1

Query: 238 HYAIENQNIVDVENESRMRIILRLNKPQKDLVSFGIWGRLFSRDVDHNKHITEEDKQKFV 417
           H+A  NQ++    NE ++   L L      + + G   R  SRD  HN    ++  ++ V
Sbjct: 187 HHARNNQSLFSKINEEKIVFFLHL----LGIDTNGHAHRPSSRDYKHNIKKVDDGVKEIV 242

Query: 418 DILNIIYGNDG 450
            + N  YGNDG
Sbjct: 243 SMFNHFYGNDG 253


>BC028363-1|AAH28363.1|  931|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class N protein.
          Length = 931

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +1

Query: 238 HYAIENQNIVDVENESRMRIILRLNKPQKDLVSFGIWGRLFSRDVDHNKHITEEDKQKFV 417
           H+A  NQ++    NE ++   L L      + + G   R  SRD   N    ++  ++ V
Sbjct: 187 HHARNNQSLFSKINEEKIVFFLHL----LGIDTNGHAHRPSSRDYKDNIKKVDDGVKEIV 242

Query: 418 DILNIIYGNDG 450
            + N  YGNDG
Sbjct: 243 SMFNHFYGNDG 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,442,040
Number of Sequences: 237096
Number of extensions: 1206795
Number of successful extensions: 2196
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)