Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_E12
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 296 8e-81
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 152 3e-37
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 150 8e-37
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 135 2e-32
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 106 1e-23
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 31 0.57
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 31 0.57
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 3.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.0
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 29 4.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 5.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 5.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 5.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 5.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 7.0
U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell m... 28 7.0
U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell m... 28 7.0
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 28 7.0
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 28 7.0
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 28 7.0
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 28 7.0
AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance prot... 28 7.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 7.0
Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical pr... 27 9.2
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 9.2
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 296 bits (727), Expect = 8e-81
Identities = 144/226 (63%), Positives = 176/226 (77%), Gaps = 2/226 (0%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 181
Y FSLTTFSPSGKL+QIEYAL AV G SVG++A +GVV+ATEN S+L D+ KV
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVG-SVLTDDQP--KV 61
Query: 182 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 361
E I+ HIG VYSGMGPD+R+LV +ARK+A +Y +MY E +PT QLV +A VMQEYTQSG
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSG 121
Query: 362 GVRPFGVSLLICGWEND--RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 535
GVRPFG SLLI GW+ + RP LFQCDPSGAYFAWKATA+GKN N KTFLEKR++E LE
Sbjct: 122 GVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALE 181
Query: 536 LDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 673
LDD +HTA+LTL+E F+ M +N+EV +C+++GF RL V D+
Sbjct: 182 LDDGIHTALLTLRESFDVGMNENNVEVAVCNSTGFHRLTKQQVHDH 227
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 152 bits (368), Expect = 3e-37
Identities = 74/208 (35%), Positives = 122/208 (58%), Gaps = 1/208 (0%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 181
Y ++T FSP G L Q+EYA AV G T+VG++ + +VI E K L D+ ++ K+
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 182 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 361
MI H+ + ++G+ D R+LV +AR Q Y L +P+ A + + +A Q +TQS
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSP 123
Query: 362 GVRPFGVSLLICGWEND-RPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 538
G RPFG+S+LI G+++D P LF+ +PSGAY+ + A A G+ + +LE++Y+E+ +
Sbjct: 124 GRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTV 183
Query: 539 DDAVHTAILTLKEGFEGQMTADNIEVGI 622
D+A ++ + NIE+ +
Sbjct: 184 DEATTLKLVVKSLAQVVPPGSQNIEIAV 211
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 150 bits (364), Expect = 8e-37
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKH-KSILYDEHSVNK 178
Y T FSP G+L Q+EYA+ A++ GT +GI +S G+V+A E K+ +L D K
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 179 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 358
V ++ +I +G+ D +L+ R A Y Y E +P QLVQ + Q YTQ
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQI 124
Query: 359 GGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLE 535
GG RPFGVSLL GW+ Y L+Q DPSG Y WKAT +G N T L++ Y +
Sbjct: 125 GGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY-KSPN 183
Query: 536 LDDAVHTAILTLKEGFEGQMTADNIEVGI 622
L++A AI L + + ++ ++ +E+ +
Sbjct: 184 LEEAKQLAIKVLWKTLDVKLASEKVEMAV 212
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 135 bits (327), Expect = 2e-32
Identities = 69/209 (33%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 181
Y + TFSP G+L Q+EYA+ AV G TS+GIK S GV++A E + S L ++ K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 182 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEY---- 349
+ HIG+ ++G+ D R LV +A+ AQ ++ Y+ I + Q VA + ++
Sbjct: 68 SKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDD 127
Query: 350 TQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED 529
++ RPFGV++L G + + LF DPSG + KA ++G + + L+++Y +
Sbjct: 128 VKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDA 187
Query: 530 LELDDAVHTAILTLKEGFEGQMTADNIEV 616
L + + + A+ LK+ E ++ + N+EV
Sbjct: 188 LTIKEGLKMALAILKQVMEEKLNSANVEV 216
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 106 bits (255), Expect = 1e-23
Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 181
Y +T +SP G+L Q+EYA+ A+ G +VGIK+ VI + ++ L H KV
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL-SSHQ-KKV 63
Query: 182 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 361
I H G+ +G+ D R+L + + Y + +P +L + + +Q TQ
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYY 123
Query: 362 GVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDLE 535
G RPFGV +LI G++ D ++ Q DPS + T++G + +T+LE+ E
Sbjct: 124 GRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKST 183
Query: 536 LDDAVHTAILTLKEGF--EGQMTADNIEVGICDA-SGFRRLEPAHV 664
+ + A+L L++ E + A N +GI S F LE A V
Sbjct: 184 PEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQV 229
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 103 bits (247), Expect = 1e-22
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Frame = +2
Query: 2 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 181
Y + +TFSP G++ Q+EYA AV GT + I+ NGVV+ + S LY +++ ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 182 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 361
+ ++G+ +G PD L A A ++ Y EP+P + VA + +T G
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LG 126
Query: 362 GVRPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 538
RPFG W LF +PSG + +KA A+GK+ K +EK E+L++
Sbjct: 127 ISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDV 186
Query: 539 DDAVHTA 559
+ V A
Sbjct: 187 NQLVKEA 193
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 95.1 bits (226), Expect = 4e-20
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
Frame = +2
Query: 14 LTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMI 190
+T FSP G++ Q+EYA A+ + T+V +K ++ VIA + + L +V V I
Sbjct: 13 ITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQI 72
Query: 191 TGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVR 370
+ +G GM PD + + +A+ A + +P L +++A + Q YTQ+ +R
Sbjct: 73 SQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMR 132
Query: 371 PFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL--D 541
G +LL +++++ P +++ DP+G Y K ++G +FLEK+ + EL
Sbjct: 133 SLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTST 192
Query: 542 DAVHTAILTLKEGFEGQMTADNIEVGIC--DASGFRRLEPAHVKDY 673
+A+ AI L+ + + ++EV + D S F +L V+ +
Sbjct: 193 EAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHH 238
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 45.2 bits (102), Expect = 4e-05
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 3/181 (1%)
Frame = +2
Query: 74 AAGGTSVGIKASNGVVIATENKHKS--ILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLV 247
+ G T V + G+V+ +++ + I+ D+H KV +T I +G D +
Sbjct: 44 STGTTIVAVAFKGGLVMGADSRATAGNIIADKHC-EKVHKLTESIYACGAGTAAD----L 98
Query: 248 TQARKMAQ-QYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWENDRPYL 424
Q KM L+ A+++ + Q G G LLI G + P+L
Sbjct: 99 DQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGY--IGAYLLIGGVDPTGPHL 156
Query: 425 FQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTAD 604
+ C +G A+ TA G T LE+ + D+ D+A L+ G G +
Sbjct: 157 YMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALEAGMHGDNASG 216
Query: 605 N 607
N
Sbjct: 217 N 217
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 498
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 498
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPGTF 498
P P TP S P HHP+ P Y PG+F
Sbjct: 1218 PTMPPPHTPSPFSAGPMS-HHPMGPPAYPGTPGSF 1251
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 626 HKYPLRYYPPSSDPRTPPSASGSPCGQHHP 537
+++P + +PP PP++ P GQHHP
Sbjct: 57 YEHPAQQHPPQHHS-VPPNSFAPPPGQHHP 85
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 413 DRSPNRRSVTKRRKDGRLLIEYILA*RSPLAGPTALWVSA 294
+R+P +RS + RR + I YI R+P G A VS+
Sbjct: 454 ERAPKKRSTSSRRNQEPITITYIGRPRTPSEGDVASTVSS 493
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 656 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 522
P P R+ P R PP P TPPS P + P P+PR
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP-PRTPPSPEPR 181
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVPDPRYTS 513
PPS +PR PP SP P P PR S
Sbjct: 175 PPSPEPRNPPRTPPSPI----PPPPPRLNS 200
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVPDPRYTS 513
PP +P TP S SP Q P P Y S
Sbjct: 340 PPVREPETPDSGYPSPAPQEPAHPSPSYPS 369
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -2
Query: 671 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH-HPVPDPRYTSFP 507
SP P P SG + P PS P PP SG P H HP PR T P
Sbjct: 59 SPPPAPRP-SGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLP 113
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 134 NKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYR 238
N++ +L H +NK M ++ M++ M PDY+
Sbjct: 315 NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 134 NKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYR 238
N++ +L H +NK M ++ M++ M PDY+
Sbjct: 315 NRYMELLSLCHIINKTNMDLQYVSMMFQFMDPDYK 349
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 602 PPSSDPRTPPSASGSPCGQHHPVP 531
PP P PP S SPC + P P
Sbjct: 71 PPMCPPPPPPMPSYSPCQSYAPAP 94
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 611 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 507
R PP+ P PP GSP G P P P S P
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 611 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 507
R PP+ P PP GSP G P P P S P
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 611 RYYPPSSDPRTPPSASGSP--CGQHHPVPDPRYTSFP 507
R PP+ P PP GSP G P P P S P
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 608 YYPPSSDPRTPPSASGSPCGQHHPVPDP 525
Y PP+ P PP AS PC PVP P
Sbjct: 83 YVPPAPLPPPPPPAS--PCCGPSPVPAP 108
>U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell
migration protein13, isoform b protein.
Length = 356
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 617 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 498
P ++YPPS PPSA+ S + HH P S F
Sbjct: 284 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 324
>U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell
migration protein13, isoform a protein.
Length = 362
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 617 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 498
P ++YPPS PPSA+ S + HH P S F
Sbjct: 290 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 330
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 215 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 313
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 215 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 313
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 215 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 313
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 215 SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQ 313
S G D+ + + A+QYY H+P P Q
Sbjct: 186 SAFGHDFEHVPPHLKTAAEQYYAQQHQPPPVPQ 218
>AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance protein
MIG-13 protein.
Length = 362
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 617 PLRYYPPSSDPRTPPSASGSPCGQ-HHPVPDPRYTSFPGTF 498
P ++YPPS PPSA+ S + HH P S F
Sbjct: 290 PPQFYPPSPPKMPPPSAASSYTPRLHHHFEGPLVPSETSAF 330
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 342 CMTVATRWTNCAVGIGSWYIR*YCWAIFLACVT-SRR*SGPMPEYTIPIWP 193
C V++R NC + + ++ C A + A V+ ++ GP P YT P P
Sbjct: 943 CQGVSSRSVNCGITV-CYFPDDSCCAGYSATVSGTQHICGPQPNYTTPYAP 992
>Z68336-6|CAE17801.1| 204|Caenorhabditis elegans Hypothetical
protein F22B3.9 protein.
Length = 204
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 596 SSDPRTPPSASGSPCGQHHPVPDPR--YTSFPG 504
S DP +PP S SP G + +PR Y PG
Sbjct: 32 SLDPPSPPFLSPSPLGDYRVNDEPRMHYLQVPG 64
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 617 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 525
P RY PS+ P PP GS +H P P
Sbjct: 900 PSRYQDPSTYPAPPPILPGSAAYEHAIRPYP 930
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 617 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 525
P RY PS+ P PP GS +H P P
Sbjct: 920 PSRYQDPSTYPAPPPILPGSAAYEHAIRPYP 950
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,654,536
Number of Sequences: 27780
Number of extensions: 392831
Number of successful extensions: 1604
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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