Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E07
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   7.3  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   9.7  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -2

Query: 340 FTNKIL*EHCLQKNKVRVW*PLQDHSLACIQQMSQSINVLTVPCYIHH 197
           F +K++ +  LQ+        L DH L   QQ  Q    L     IHH
Sbjct: 580 FEDKLIRQPSLQQPLTTTTVLLSDHYLPLQQQQQQQARHLPQQQAIHH 627


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 326 SVRTLPPEKQSQSMVTSPRPLL 261
           ++RT+PPE+Q Q+ + + R  L
Sbjct: 322 TMRTIPPEEQLQTELLAARESL 343


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 451 QESWP*TRSERQGPDTKLPYRNREAIQ 531
           Q+ W   + ++Q P   LP+R +  +Q
Sbjct: 366 QQQWQQQQQQQQQPRQSLPHRKQTQLQ 392


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 302 KQSQSMVTSPRPLLGLYSTDESKHQCIDCTLL 207
           K S S    P P  G+    + + + ++CT+L
Sbjct: 52  KVSDSTPVEPPPTAGIVYLSDDEEEELNCTIL 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,047
Number of Sequences: 2352
Number of extensions: 11711
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)