Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_E07
(587 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 135 9e-32
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 135 9e-32
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 135 9e-32
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 135 9e-32
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 114 2e-25
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 84 4e-16
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 84 4e-16
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 135 bits (327), Expect = 9e-32
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 72 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 129
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+
Sbjct: 130 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVD 185
Query: 353 VYYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYK 532
Y E+++ TI + + PHLVIY+D PV V + I+ +G HE+K +T +L +IE YK
Sbjct: 186 HYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMK---ITSAYLQDIENAYK 242
Query: 533 TKYLKDISTHAELLVY 580
+L ++S E+L Y
Sbjct: 243 KTFLPEMSEKCEVLQY 258
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 135 bits (327), Expect = 9e-32
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 71 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 128
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+
Sbjct: 129 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVD 184
Query: 353 VYYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYK 532
Y E+++ TI + + PHLVIY+D PV V + I+ +G HE+K +T +L +IE YK
Sbjct: 185 HYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMK---ITSAYLQDIENAYK 241
Query: 533 TKYLKDISTHAELLVY 580
+L ++S E+L Y
Sbjct: 242 KTFLPEMSEKCEVLQY 257
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 135 bits (327), Expect = 9e-32
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 72 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 129
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+
Sbjct: 130 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVD 185
Query: 353 VYYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYK 532
Y E+++ TI + + PHLVIY+D PV V + I+ +G HE+K +T +L +IE YK
Sbjct: 186 HYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMK---ITSAYLQDIENAYK 242
Query: 533 TKYLKDISTHAELLVY 580
+L ++S E+L Y
Sbjct: 243 KTFLPEMSEKCEVLQY 258
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 135 bits (327), Expect = 9e-32
Identities = 82/196 (41%), Positives = 114/196 (58%), Gaps = 3/196 (1%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 72 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 129
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+
Sbjct: 130 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVD 185
Query: 353 VYYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYK 532
Y E+++ TI + + PHLVIY+D PV V + I+ +G HE+K +T +L +IE YK
Sbjct: 186 HYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMK---ITSAYLQDIENAYK 242
Query: 533 TKYLKDISTHAELLVY 580
+L ++S E+L Y
Sbjct: 243 KTFLPEMSEKCEVLQY 258
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 114 bits (275), Expect = 2e-25
Identities = 71/168 (42%), Positives = 98/168 (58%), Gaps = 5/168 (2%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 77 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 134
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+
Sbjct: 135 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCVD 190
Query: 353 VYYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGH--EHEVKGKA 490
Y E+++ TI + + PHLVIY+D PV V + I+ +G + +KG+A
Sbjct: 191 HYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQA 238
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 83.8 bits (198), Expect = 4e-16
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 72 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 129
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+ S
Sbjct: 130 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 83.8 bits (198), Expect = 4e-16
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Frame = +2
Query: 2 EFAASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DT---RTFDHINFNQTPNH 172
+ A +A+ LG KHFPEA IHY D + + + +D N ++
Sbjct: 72 KLAKEIAEKLGFKHFPEAG--IHYPDSTTGDGKPLATDYNGNCSLEKFYDDPRSNDGNSY 129
Query: 173 RLAANFQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRS 352
RL Q +Y +R QY DAL HLL TGQGVVLERS +SDFVFLEAM++Q FI K+ S
Sbjct: 130 RL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRKQCES 185
Score = 44.0 bits (99), Expect = 4e-04
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +2
Query: 356 YYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYKT 535
Y E+++ TI + + PHLVIY+D PV HE+K +T +L +IE YK
Sbjct: 227 YNEVKSVTICDYLPPHLVIYIDVPVP----------EPHEMK---ITSAYLQDIENAYKK 273
Query: 536 KYLKDISTHAELLVY 580
+L ++S E+L Y
Sbjct: 274 TFLPEMSEKCEVLQY 288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,925,318
Number of Sequences: 237096
Number of extensions: 1704420
Number of successful extensions: 3429
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3422
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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