Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E07
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical pr...   152   2e-37
U21320-4|AAM54175.1|  188|Caenorhabditis elegans Hypothetical pr...    32   0.35 
AL117200-15|CAB55049.2|  609|Caenorhabditis elegans Hypothetical...    30   1.4  
AF039713-7|AAB96722.1|  203|Caenorhabditis elegans Hypothetical ...    29   3.2  
AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical ...    27   7.5  

>U21320-3|AAA62532.1|  436|Caenorhabditis elegans Hypothetical
           protein K04G7.4a protein.
          Length = 436

 Score =  152 bits (368), Expect = 2e-37
 Identities = 82/194 (42%), Positives = 115/194 (59%), Gaps = 1/194 (0%)
 Frame = +2

Query: 8   AASLADDLGMKHFPEANMDIHYVRPNGIDLRIFDKQVP*DTRTFDHINFNQTPNHRLAAN 187
           A  LAD LG  HFPE  MD   V   G DLR +  + P   R  D   F + P+  L+A 
Sbjct: 89  AKQLADQLGFVHFPEFRMDDILVDRYGNDLRNYYNKFPARYRLPDISMFYKNPSGELSAA 148

Query: 188 FQIMMYIARYSQYIDALTHLLNTGQGVVLERSPYSDFVFLEAMFSQNFISKEVRSVYYEL 367
            Q  ++  R+ QY++AL H+LNTGQGVVLER+P+SDFVF  AM  +N+I  E    YY +
Sbjct: 149 MQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMRDKNYIGHEYFKHYYFV 208

Query: 368 RANTIEEL-MRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYKTKYL 544
           R N + +L   PHLV+YL+TP +  ++ IK RG+  E+    +   +L  IE+ YK   L
Sbjct: 209 RKNALPQLHFWPHLVVYLNTPTNKCLENIKRRGNTDEI--ATVDERYLKTIEESYKDS-L 265

Query: 545 KDISTHAELLVYDW 586
           ++   H+++L YDW
Sbjct: 266 REYRNHSKILAYDW 279


>U21320-4|AAM54175.1|  188|Caenorhabditis elegans Hypothetical
           protein K04G7.4b protein.
          Length = 188

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 17/31 (54%), Positives = 17/31 (54%)
 Frame = +2

Query: 8   AASLADDLGMKHFPEANMDIHYVRPNGIDLR 100
           A  LAD LG  HFPE  MD   V   G DLR
Sbjct: 89  AKQLADQLGFVHFPEFRMDDILVDRYGNDLR 119


>AL117200-15|CAB55049.2|  609|Caenorhabditis elegans Hypothetical
           protein Y50E8A.6 protein.
          Length = 609

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 380 IEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNF-LTEIEKQYKTK 538
           IEE +  HL       V  V++L KS G +  V G  L P+F   E E +Y  K
Sbjct: 479 IEEQVATHLCQTYGDKVYEVLKLCKSTGQKFPVIGHRLHPDFPFLEAEVRYAVK 532


>AF039713-7|AAB96722.1|  203|Caenorhabditis elegans Hypothetical
           protein F57B10.5 protein.
          Length = 203

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +2

Query: 356 YYELRANTIEELMRPHLVIYLDTPVDXVIQLIKSRGHEHEVKGKALTPNFLTEIEKQYKT 535
           +YE     ++ +    +V      VD +I+    +    + K +  + NF  E+E  YK 
Sbjct: 32  FYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNGKVLYKDTKKQYDSINFKAEVEGTYKA 91

Query: 536 KYLKDISTHAELLVY-DW 586
            +  + ST +  +VY DW
Sbjct: 92  CFSNEFSTFSHKIVYMDW 109


>AL110477-1|CAB54325.1|  331|Caenorhabditis elegans Hypothetical
           protein Y113G7B.2 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
 Frame = -2

Query: 268 HSLACIQQMSQSINVLTVPCYIHHNLEVSCQT------VIWSLIKVDMVKC 134
           H+    Q +  +I+++++P YI+    + C+T      V WS+I V +  C
Sbjct: 13  HTAQFQQLVLHTISIISIPIYIYGFFCILCKTPSTMNSVKWSMINVHVFSC 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,491,978
Number of Sequences: 27780
Number of extensions: 269246
Number of successful extensions: 558
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)