Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E06
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    27   0.59 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.77 
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   9.5  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +1

Query: 448 LIPGLYTYHLEDYSW--TESLLNFT 516
           +IPGLY  ++ED +W  T S + FT
Sbjct: 32  VIPGLYDLNVEDTNWVLTSSFIIFT 56


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 433  TTPVVLIPGLYTYHLEDYSWTESLLNF 513
            T P  +IP +     E+YSW  S +NF
Sbjct: 1470 TLPHEIIPDVNACKAENYSWENSPMNF 1496


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 304 FSSYADVSDRVEFESYDDDGHIY 372
           F SYA++       S+D+ G+ Y
Sbjct: 113 FESYAEIDKNGNIASFDNRGNTY 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,674
Number of Sequences: 2352
Number of extensions: 10865
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)