Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E04
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB...    54   1e-07
AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p pro...    31   1.00 
AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA...    31   1.00 
AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p pro...    28   9.3  
AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA ...    28   9.3  

>AE014297-2636|AAF55643.2|  426|Drosophila melanogaster CG5558-PB,
           isoform B protein.
          Length = 426

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
 Frame = +2

Query: 137 AEADESPLI---PI--HTKR---AAFALANLFLYSVAMFTLPFVAFFGVRHALIEYY-HI 289
           A  D+SP +   P+  HT++   +A     L  YSV MFTLPF+ F+GVR  L E + H+
Sbjct: 16  ATTDDSPAVIDSPVEHHTQQEDTSAEVFLWLLAYSVLMFTLPFLGFYGVRSWLQESFPHL 75

Query: 290 EGFAVTAWSVLAXXXXXXXXXXXYAYQAYHEK 385
           + F V  WSVL            Y  +A+ EK
Sbjct: 76  DLFTVNCWSVLTAVVVVNLVVAMYVLKAFREK 107


>AY069449-1|AAL39594.1|  433|Drosophila melanogaster LD16340p
           protein.
          Length = 433

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 9   HSVKVPRHYKVASNILKQVSTEGGSVKSLLYDNK 110
           HS+KVP  Y+  + ILK    +   +K+L++  K
Sbjct: 6   HSIKVPTQYRATAKILKAALEQQKCIKTLIFAEK 39


>AE014297-2635|AAF55642.1|  433|Drosophila melanogaster CG5558-PA,
           isoform A protein.
          Length = 433

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 9   HSVKVPRHYKVASNILKQVSTEGGSVKSLLYDNK 110
           HS+KVP  Y+  + ILK    +   +K+L++  K
Sbjct: 6   HSIKVPTQYRATAKILKAALEQQKCIKTLIFAEK 39


>AY071028-1|AAL48650.1|  663|Drosophila melanogaster RE11035p
           protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 200 LPVQKQPVSCVWVLVDSH-QPQPLSLIEVSKLI 105
           + +   P SC W+L  SH QPQ   L + SK I
Sbjct: 394 ISIDDNPWSCQWMLNFSHMQPQLFRLFQYSKYI 426


>AE014134-629|AAF51091.1|  663|Drosophila melanogaster CG8852-PA
           protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 200 LPVQKQPVSCVWVLVDSH-QPQPLSLIEVSKLI 105
           + +   P SC W+L  SH QPQ   L + SK I
Sbjct: 394 ISIDDNPWSCQWMLNFSHMQPQLFRLFQYSKYI 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,598,133
Number of Sequences: 53049
Number of extensions: 320509
Number of successful extensions: 751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)