Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_E03
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.65 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.65 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
 Frame = +1

Query: 124 WRPFLPAHLWWPWLRLLGHFTNLPGPSDPRKPLDDAAAFTPFVHR--DTLHKRASLVFLR 297
           W P LP  +    L +L     L    +   PL D      ++H     L  R   +   
Sbjct: 502 WMPLLPNWILENILDMLV-LPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYP 560

Query: 298 VQKRKRSAGLAGWIP 342
           + +RK  + L GW P
Sbjct: 561 IIRRKLGSALGGWHP 575


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 434 IVRTPGVRLVYQYVKKPKKI 375
           + +  G RLVYQ+V  PK I
Sbjct: 527 LAKVDGQRLVYQFVDVPKDI 546


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 124 WRPFLPAHLW--WPWLRLLGHFTNL-PGPS 204
           W PF   +    +PW++L GH  N   GP+
Sbjct: 228 WTPFFQTYKKQRYPWVQLAGHQGNFRAGPT 257


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 124 WRPFLPAHLW--WPWLRLLGHFTNL-PGPS 204
           W PF   +    +PW++L GH  N   GP+
Sbjct: 143 WTPFFQTYKKQRYPWVQLAGHQGNFRAGPT 172


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 124 WRPFLPAHLW--WPWLRLLGHFTNL-PGPS 204
           W PF   +    +PW++L GH  N   GP+
Sbjct: 462 WTPFFQTYKKQRYPWVQLAGHQGNFRAGPT 491


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 437 SFGLTLCCKTNVV 475
           +F  T+CCKT ++
Sbjct: 338 AFKQTICCKTRII 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,168
Number of Sequences: 438
Number of extensions: 2859
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)