Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D24
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kin...    28   9.5  
AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein.      28   9.5  
AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol 3-...    28   9.5  

>AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kinase
           SMG-1 protein.
          Length = 3031

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 276 HFDSLMHFPVLRFRTFGTLQKHCGTSH 196
           H D  +HFP +++    TL  HC T H
Sbjct: 20  HSDLAVHFPAIQYAVLYTLYSHC-TRH 45


>AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein.
          Length = 3521

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 276 HFDSLMHFPVLRFRTFGTLQKHCGTSH 196
           H D  +HFP +++    TL  HC T H
Sbjct: 510 HSDLAVHFPAIQYAVLYTLYSHC-TRH 535


>AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol
           3-kinase-related protein kinase protein.
          Length = 3657

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 276 HFDSLMHFPVLRFRTFGTLQKHCGTSH 196
           H D  +HFP +++    TL  HC T H
Sbjct: 646 HSDLAVHFPAIQYAVLYTLYSHC-TRH 671


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,058,153
Number of Sequences: 237096
Number of extensions: 1037874
Number of successful extensions: 2750
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2750
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)