Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D24
         (350 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-761|AAN13387.1|  455|Drosophila melanogaster CG31454-PA...    31   0.31 
AY122093-1|AAM52605.1|  607|Drosophila melanogaster GH04589p pro...    29   1.7  
AE014134-3148|AAF53836.1|  578|Drosophila melanogaster CG10366-P...    29   1.7  
X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ...    27   6.7  
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ...    27   6.7  
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P...    27   6.7  
AE013599-3296|AAF46777.1|  176|Drosophila melanogaster CG13489-P...    27   6.7  
AE014297-4086|ABC66192.1|  201|Drosophila melanogaster CG34006-P...    27   8.9  

>AE014297-761|AAN13387.1|  455|Drosophila melanogaster CG31454-PA
           protein.
          Length = 455

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 66  PSTVKEFL*ENARLVNTQCCTAHNKQSRHVTTLPSMRWTHHQGCATY 206
           PSTV      N   +N +C T++ K   H+TTL      H  GCA Y
Sbjct: 205 PSTVIIPQRSNLGSLNFRCITSYLKVYNHLTTLRHPCCPHQFGCAVY 251


>AY122093-1|AAM52605.1|  607|Drosophila melanogaster GH04589p
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 122 LYCPQQAEPSCDNPTVHEMDPPSGLCD 202
           LYC  Q+ PS + P +HE+    GL D
Sbjct: 133 LYCILQSTPSQERPNLHELRSKFGLLD 159


>AE014134-3148|AAF53836.1|  578|Drosophila melanogaster CG10366-PA
           protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 122 LYCPQQAEPSCDNPTVHEMDPPSGLCD 202
           LYC  Q+ PS + P +HE+    GL D
Sbjct: 104 LYCILQSTPSQERPNLHELRSKFGLLD 130


>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 134  QQAEPSCDNPTVHE 175
            ++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051


>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 134  QQAEPSCDNPTVHE 175
            ++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051


>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
            protein.
          Length = 1332

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 134  QQAEPSCDNPTVHE 175
            ++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051


>AE013599-3296|AAF46777.1|  176|Drosophila melanogaster CG13489-PA
           protein.
          Length = 176

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 228 GTLQKHCGTSHSPDGGSISWTVGLSHDGSACCGQ 127
           GT Q+H    H+P+G + S T+  ++DG+A   Q
Sbjct: 68  GTGQRH---QHNPNGSTGSKTIAKANDGNAAINQ 98


>AE014297-4086|ABC66192.1|  201|Drosophila melanogaster CG34006-PA
           protein.
          Length = 201

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 127 LPTTSRAVM*QPYRP*DGPTIRAVRRTAVLLQR 225
           +PT+S   + +   P  GP +R+ RR+AVL +R
Sbjct: 70  IPTSSFHSISKRQTPLGGPVLRSARRSAVLQRR 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,822,665
Number of Sequences: 53049
Number of extensions: 344734
Number of successful extensions: 970
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)