Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D22
         (378 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical ...    31   0.27 
U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical pr...    31   0.36 
AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical ...    31   0.36 
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr...    28   2.5  
AL117204-42|CAB55146.2|  714|Caenorhabditis elegans Hypothetical...    27   5.9  
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    26   7.8  

>AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.3 protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 0.27
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +3

Query: 138 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 311
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   +D+
Sbjct: 23  CICMRESG--CKPIGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEAAWKRCANDL 80

Query: 312 SVAATCAKKIYKRHKFD-AGYG 374
           S A TC +  Y R+K   AG G
Sbjct: 81  SCATTCVENYYNRYKSQCAGTG 102


>U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical
           protein F22A3.6a protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.36
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +3

Query: 138 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVT--CNQLLTDDI 311
           C+   ESG     IG     GS   G +QI   Y+   G    K    T    +   DD+
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEAAWKRCADDL 80

Query: 312 SVAATCAKKIYKRHK 356
           + A TC +  Y R+K
Sbjct: 81  NCATTCVENYYNRYK 95


>AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.2 protein.
          Length = 139

 Score = 30.7 bits (66), Expect = 0.36
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = +3

Query: 138 CLVENESGRFTDKIGKVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLL----TD 305
           C+   ESG     IG     GS   G +QI   Y+   G  PGK  H    ++      D
Sbjct: 23  CICMRESG--CKPIGCHMDVGSLSCGYYQIKIPYYEDCGQ-PGKK-HGESTEVAWKRCAD 78

Query: 306 DISVAATCAKKIYKRHKFD-AGYG 374
           D+  A  C +  Y R+K + AG G
Sbjct: 79  DLKCATNCVENYYNRYKHECAGTG 102


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 183  KVNKNGSRDYGLFQINDKYWCSTGSTPGKDCHVTC 287
            KV  NG  D G  +I ++Y C  G    +D  V C
Sbjct: 902  KVLPNGRPDVGSLKIKEEYLCQAGQVVVRDLCVPC 936


>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
           protein B0024.8 protein.
          Length = 1185

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 81  LVQELRRQGFDESLMSNWVCLVEN 152
           L+ EL      E + SNW CLVEN
Sbjct: 159 LITELHHILIPELVKSNWTCLVEN 182


>AL117204-42|CAB55146.2|  714|Caenorhabditis elegans Hypothetical
           protein Y116A8C.4 protein.
          Length = 714

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 150 NESG-RFTDKIGKVNKNGSRDYGLFQINDKY 239
           NES     + +  + K G R++GLFQI+ KY
Sbjct: 194 NESDFNLNEMLNNLVKLGQRNFGLFQISFKY 224


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
            F10F2.2 protein.
          Length = 1343

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 75   CGLVQELRRQGFDESLMSNWVCLVENESGRFTDKIG--KVNKNGS 203
            C L+ +L   G DE      V L ENE GRF    G  K+ KN S
Sbjct: 1168 CQLMAQLGWIG-DEEQKGPTVFLDENECGRFDSSFGPVKIEKNVS 1211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,551,338
Number of Sequences: 27780
Number of extensions: 164028
Number of successful extensions: 426
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)