Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D21
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protei... 93 2e-19
AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3 pr... 93 2e-19
AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1 pr... 73 2e-13
AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical... 73 2e-13
U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protei... 69 2e-12
AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2 pr... 69 2e-12
AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical... 32 0.35
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 28 5.7
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 27 7.5
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 27 10.0
>U55375-5|AAC69045.1| 126|Caenorhabditis elegans Profilin protein 3
protein.
Length = 126
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/126 (38%), Positives = 67/126 (53%)
Frame = +2
Query: 32 MSWQDYVDKQLMASRCVSKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 211
MSW D ++ L+ S VSKAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 212 VTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGDY 391
+ + G +++ L+ I K G G KT QAV+IS+YE+ +QP+ + L DY
Sbjct: 61 LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120
Query: 392 LITCGY 409
+ Y
Sbjct: 121 FRSIKY 126
>AY530910-1|AAT01435.1| 126|Caenorhabditis elegans profilin-3
protein.
Length = 126
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/126 (38%), Positives = 67/126 (53%)
Frame = +2
Query: 32 MSWQDYVDKQLMASRCVSKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFENESLLTSGG 211
MSW D ++ L+ S VSKAAI G DG VWAKS+ F IS +E F + L G
Sbjct: 1 MSWSDIINNNLIGSGNVSKAAILGFDGAVWAKSDNFNISVEEAVAAGKAFTSLDALLGTG 60
Query: 212 VTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGDY 391
+ + G +++ L+ I K G G KT QAV+IS+YE+ +QP+ + L DY
Sbjct: 61 LRLEGQKFLVLNADNDRIIGKQGGSGFFIYKTIQAVIISIYEKGLQPEMCSKTTGALADY 120
Query: 392 LITCGY 409
+ Y
Sbjct: 121 FRSIKY 126
>AY530908-1|AAT01433.1| 132|Caenorhabditis elegans profilin-1
protein.
Length = 132
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +2
Query: 38 WQDYVDKQLMASRCVSKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 205
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 206 GGVTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYEEPIQ-PQQAASVVEKL 382
G I G Y+ E +I K G +KT+ AV+I++YE P + Q VE +
Sbjct: 64 KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123
Query: 383 GDYLITCGY 409
YL GY
Sbjct: 124 QTYLNNAGY 132
>AL034393-15|CAA22318.1| 132|Caenorhabditis elegans Hypothetical
protein Y18D10A.20 protein.
Length = 132
Score = 72.5 bits (170), Expect = 2e-13
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Frame = +2
Query: 38 WQDYVDKQLMASRCVSKAAIAGH-DGNVWAKSEG---FEISKDEVAKIVAGFENESLLTS 205
W Y+D A+ + + AI G DG+VWA++E F+ S++E+ VA F + + + +
Sbjct: 4 WNAYIDTMTAAAPSIKRCAIVGAADGSVWARTEADNVFKASEEELKTFVALFNDVTQVPA 63
Query: 206 GGVTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYEEPIQ-PQQAASVVEKL 382
G I G Y+ E +I K G +KT+ AV+I++YE P + Q VE +
Sbjct: 64 KGADIEGVHYVVPRTEESLIFGKKENTGFFAVKTKSAVLIAVYEGPNEVAAQVRKAVESM 123
Query: 383 GDYLITCGY 409
YL GY
Sbjct: 124 QTYLNNAGY 132
>U40941-2|AAA81708.3| 131|Caenorhabditis elegans Profilin protein 2
protein.
Length = 131
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 38 WQDYVDKQLMASRCVSKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 208
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 209 GVTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 385
G + YI E++I K + G KT QA+VI++YE + Q + VE +
Sbjct: 64 GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123
Query: 386 DYLITCGY 409
YL + GY
Sbjct: 124 QYLASSGY 131
>AY530909-1|AAT01434.1| 131|Caenorhabditis elegans profilin-2
protein.
Length = 131
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Frame = +2
Query: 38 WQDYVDKQLMASRCVSKAAIAGHDGNVWAKS---EGFEISKDEVAKIVAGFENESLLTSG 208
W DY+ S + +AAI G DG+VWA+S F ++ E+ + A F + + +
Sbjct: 4 WDDYIKLLFGKSPAIKRAAIIGSDGSVWARSGDANAFRATEVELKRFAALFNDINSVPGT 63
Query: 209 GVTIAGTRYIYLSGTERIIRAKLGKVGVHCMKTQQAVVISLYE-EPIQPQQAASVVEKLG 385
G + YI E++I K + G KT QA+VI++YE + Q + VE +
Sbjct: 64 GADLEEIHYIVPRVEEKLIFGKKEQTGFFAAKTNQAIVIAMYEGDNAQSASVRAGVEYIA 123
Query: 386 DYLITCGY 409
YL + GY
Sbjct: 124 QYLASSGY 131
>AF067613-13|ABA54415.1| 443|Caenorhabditis elegans Hypothetical
protein F56D6.1 protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.35
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 225 PAIVTPPLVRSDSFSKPATIFATSSFDISNPSDL 124
P++VT L+ S S+P T FA S FD+ P D+
Sbjct: 180 PSVVTDTLINSYLSSQPVT-FAVSRFDLRQPEDI 212
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 585 VTQLLKLITRRCHKLSNIKNKYERSLSLHRIYKM 484
+T LLK++ RC LS++ K+E +S + +Y M
Sbjct: 413 ITNLLKIVIDRCPGLSDLP-KFEEVVSTNFVYHM 445
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 73 QMCFKGSNCRSRRKCLGQV 129
+ CF+ S+C S+R+CL V
Sbjct: 1265 EYCFRNSHCESQRQCLKNV 1283
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 225 PAIVTPPLVRSDSFSKPATIFATSSFDISNPSDL 124
P++VT L S S S + +A S FD+ P D+
Sbjct: 193 PSVVTDALYYS-SLSSQSVTYAVSRFDLRQPEDI 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,547
Number of Sequences: 27780
Number of extensions: 270403
Number of successful extensions: 723
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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