Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_D19
         (346 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    28   2.1  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    28   2.1  
Z81065-2|CAB02967.2|  310|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical pr...    26   6.3  
AF003136-9|AAO38652.1|  167|Caenorhabditis elegans Hypothetical ...    26   6.3  
AL110479-27|CAB60322.2|  333|Caenorhabditis elegans Hypothetical...    26   8.3  

>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 203 QNENRLSLLLIRLCQNLKQLRKTARTLKNKTM 298
           +NE R S +L  + + + + +KTARTL  + M
Sbjct: 382 ENEKRRSEVLTEMTREISEAKKTARTLLTQMM 413


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 203 QNENRLSLLLIRLCQNLKQLRKTARTLKNKTM 298
           +NE R S +L  + + + + +KTARTL  + M
Sbjct: 382 ENEKRRSEVLTEMTREISEAKKTARTLLTQMM 413


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 203 QNENRLSLLLIRLCQNLKQLRKTARTLKNKTM 298
           +NE R S +L  + + + + +KTARTL  + M
Sbjct: 382 ENEKRRSEVLTEMTREISEAKKTARTLLTQMM 413


>Z81065-2|CAB02967.2|  310|Caenorhabditis elegans Hypothetical
           protein F16C3.2 protein.
          Length = 310

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 324 LIETWSIRLIVLFFRVR-AVFLNCFRFWHNLISSRL 220
           ++  WS+RL+++F+ V  ++  + F  WH   S ++
Sbjct: 1   MLSFWSVRLLLIFYFVEYSLSASSFLAWHKASSQQI 36


>Z81454-4|CAD89725.1|  483|Caenorhabditis elegans Hypothetical
           protein B0391.6 protein.
          Length = 483

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +2

Query: 185 KQGNSKQNENRLSLLLIRLCQNLKQLRKTARTLKNKTMSR-MLHVSMS 325
           + GN   N ++    L  +C  ++ LRKTA  L+N    R ++H+S S
Sbjct: 57  ESGNHDLNYDKRLEPLSAICSPIQILRKTALRLRNVFRPRKVIHISDS 104


>AF003136-9|AAO38652.1|  167|Caenorhabditis elegans Hypothetical
           protein F28B3.6 protein.
          Length = 167

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 224 LLLIRLCQNLKQLRKTARTLKNKTMSRML---HVSMSSETLGQM 346
           ++ +  C+N+ ++RK    +KNK     L   H++++S  +G M
Sbjct: 100 VISLATCKNMNRVRKFQNLVKNKFDQTQLWQDHIAIASAAVGYM 143


>AL110479-27|CAB60322.2|  333|Caenorhabditis elegans Hypothetical
           protein Y105C5B.6a protein.
          Length = 333

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 221 STDFRFVCCFLVFLSFWCLLRSFTSVNSSIWG 126
           ST F  +C    FL  W LL ++       WG
Sbjct: 60  STPFFRLCITTAFLDIWTLLNNYLGAMFPKWG 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,699,713
Number of Sequences: 27780
Number of extensions: 87211
Number of successful extensions: 281
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)