Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_D16
(357 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 93 6e-20
01_06_1721 - 39426957-39428005,39428812-39428839 89 9e-19
08_01_0142 - 1121762-1122822,1123087-1123114 87 3e-18
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 83 6e-17
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 66 1e-11
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 62 2e-10
05_04_0453 + 21380962-21382320 33 0.087
08_01_0178 - 1509100-1511214 29 1.1
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187 28 1.9
03_05_0306 - 22956474-22956980 28 2.5
08_02_0152 - 13304578-13305288 27 3.3
08_02_0147 - 13214179-13214889 27 3.3
02_02_0707 + 13144147-13144788,13145115-13148663 27 3.3
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 27 4.3
08_02_0075 - 11953723-11956203,11958213-11958512 27 5.7
08_01_0812 + 7886057-7886872,7887115-7887702 27 5.7
05_05_0171 - 22936215-22936590,22937359-22937550,22937591-22938561 27 5.7
01_06_0754 + 31721356-31721783,31721914-31722004,31722276-317223... 27 5.7
01_06_0205 - 27495030-27495128,27495397-27496265,27496352-274965... 27 5.7
09_05_0003 + 20016534-20016703,20017679-20017915,20018585-200186... 26 7.6
08_02_0538 - 18321101-18321128,18321767-18322587 26 7.6
07_01_1073 + 9566727-9566963,9566992-9567180 26 7.6
02_01_0756 - 5612722-5613906 26 7.6
02_01_0183 - 1249053-1249268 26 7.6
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 93.1 bits (221), Expect = 6e-20
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCKK 352
+VPIVEPE+L DG HD+DR V+EVVLAA YKAL++HHV LEGTLLKPNMVT G KK
Sbjct: 178 LVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNMVTPGSDAKK 237
Score = 71.3 bits (167), Expect = 2e-13
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = +1
Query: 1 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLARYASICQ 162
QG DDL +RCA+Y + G FAKWR VLKIG N PS AI NA LARYA ICQ
Sbjct: 121 QGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQ 174
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 89.0 bits (211), Expect = 9e-19
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCKK 352
+VPIVEPE+L DG HD++R VTE VLAA YKAL++HHV LEG+LLKPNMVT G KK
Sbjct: 178 LVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNMVTPGSESKK 237
Score = 70.1 bits (164), Expect = 5e-13
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = +1
Query: 1 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLARYASICQ 162
QG DDL +RCA+Y + G FAKWR VLKIG N PS +I NA LARYA ICQ
Sbjct: 121 QGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQ 174
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 87.4 bits (207), Expect = 3e-18
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCKK 352
+VPIVEPE+L DGEH ++ VTE VLAA YKALSDHHV LEGTLLKPNMVT G +
Sbjct: 180 LVPIVEPEILVDGEHGIEACAEVTERVLAACYKALSDHHVLLEGTLLKPNMVTPGSDAAR 239
Score = 60.1 bits (139), Expect = 5e-10
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQAILENANVLARYASICQ 162
QG D L +RC +Y G FAKWR VL IGR + PS A+ NA LARYA ICQ
Sbjct: 121 QGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAIICQ 176
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 83.0 bits (196), Expect = 6e-17
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCKK 352
+VPIVEPE+L DG HD+ VTE VLAAVYK+L+DH V LEGTLLKPNMVT G K
Sbjct: 370 LVPIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSDSPK 429
Score = 66.5 bits (155), Expect = 6e-12
Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIG-RNTPSYQAILENANVLARYASICQ 162
QGLD L RCA+Y + G FAKWR VLKIG PS A+ +NA LARYA ICQ
Sbjct: 312 QGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALICQ 366
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 65.7 bits (153), Expect = 1e-11
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCK 349
+VPIVEPE+L DGEH +DR V + V A + +++++V EG LLKP+MVT G CK
Sbjct: 210 LVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECK 268
Score = 52.0 bits (119), Expect = 1e-07
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +1
Query: 1 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLARYASICQ 162
QGLD LA R A Y + G FAKWR V+ I N PS A+ E A LARYA+I Q
Sbjct: 154 QGLDGLASREAAYYQQGARFAKWRTVVSI-PNGPSELAVKEAAWGLARYAAISQ 206
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 61.7 bits (143), Expect = 2e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +2
Query: 173 IVPIVEPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*LEGTLLKPNMVTAGQSCK 349
+VPIVEPE+L DGEH ++R V + V A + +S+++V LEG LLKP+MVT G K
Sbjct: 263 LVPIVEPEILLDGEHRVERTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESK 321
>05_04_0453 + 21380962-21382320
Length = 452
Score = 32.7 bits (71), Expect = 0.087
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 26 VALSTRRTAATLPSGVAY*RSAA-----TLHRTKPSWRMPMCWLATPPSARVRRIV 178
++L R+ +LP+G Y R++ T HRT P+ R+P+ P+ +RR++
Sbjct: 36 ISLEVMRSPVSLPTGATYDRASIQRWLDTGHRTCPATRLPLASTDLVPNLLLRRLI 91
>08_01_0178 - 1509100-1511214
Length = 704
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 113 PSWRMPMCWLATPPS 157
P+W MPMC A PPS
Sbjct: 636 PTWSMPMCGSAAPPS 650
>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
Length = 297
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 212 EHDLDRAQNVTEVVLAAVYKALSDHH 289
E L+R V ++ LAA KA SDHH
Sbjct: 202 EDILNRTTTVEDISLAAASKATSDHH 227
>03_05_0306 - 22956474-22956980
Length = 168
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -3
Query: 166 DSGRW-RRSEPTHWHSPRWL 110
+ G W RR+ P W PRWL
Sbjct: 59 EHGAWSRRASPASWGEPRWL 78
>08_02_0152 - 13304578-13305288
Length = 236
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 14 TWPSVALSTRRTAATLPSGVAY*RSAATLHRTKPSWRMPMCWLATP 151
+W SVA + R + PSG Y RS R + S MP L+ P
Sbjct: 11 SWRSVAHTPSRASVPTPSGYDYFRS--PFFRERSSGSMPTLLLSIP 54
>08_02_0147 - 13214179-13214889
Length = 236
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 14 TWPSVALSTRRTAATLPSGVAY*RSAATLHRTKPSWRMPMCWLATP 151
+W SVA + R + PSG Y RS R + S MP L+ P
Sbjct: 11 SWRSVAHTPSRASVPTPSGYDYFRS--LFFRERSSGSMPTLLLSIP 54
>02_02_0707 + 13144147-13144788,13145115-13148663
Length = 1396
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 161 RVRRIVPIVEPEVLPDGEHDL 223
+V +I P ++PEV PD E D+
Sbjct: 1356 QVNKIAPSLQPEVFPDSEGDV 1376
>04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 249 SYWLPYTRHSATTMSNLREPF-SNLIWLPLVS 341
SY PY HS T +SNL + S IW LV+
Sbjct: 1097 SYMSPYYLHSDTLLSNLLGQYVSTAIWNRLVA 1128
>08_02_0075 - 11953723-11956203,11958213-11958512
Length = 926
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 235 LSAVQVVLAIRQNLRLNYWHDTPDSGRWRRSE 140
L+A V +R+N+ +YW DS W+ E
Sbjct: 390 LAAKSVGTLLRRNINEDYWTRILDSNEWKLQE 421
>08_01_0812 + 7886057-7886872,7887115-7887702
Length = 467
Score = 26.6 bits (56), Expect = 5.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 188 EPEVLPDGEHDLDRAQNVTEVVLAAVYKALSDHHV*L-----EGTLLKPNMVTAGQSCKK 352
EPE+LP + D + + VLA +A DHH L EG N++T SC +
Sbjct: 242 EPEMLPGMLYLYDCFSDASPTVLAFFKEASDDHHFRLFISDTEGFNAVVNLITDMISCLR 301
Query: 353 T 355
+
Sbjct: 302 S 302
>05_05_0171 - 22936215-22936590,22937359-22937550,22937591-22938561
Length = 512
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 133 HWHSPRWLGTMECCGRSSIRNATWQSGSRP 44
+WH P WLGT R++ RNA+ +G P
Sbjct: 409 NWHGPLWLGTDWDMFRAA-RNASRAAGRVP 437
>01_06_0754 +
31721356-31721783,31721914-31722004,31722276-31722365,
31722952-31723078,31723237-31723280,31723749-31724009
Length = 346
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = -3
Query: 157 RWRRSEPTHWHSPRWL-GTMECCG 89
+WR+ E W P WL G CG
Sbjct: 174 KWRQFETDRWTQPHWLAGNSTQCG 197
>01_06_0205 -
27495030-27495128,27495397-27496265,27496352-27496511,
27497136-27497208,27497311-27497430,27498454-27498618,
27498695-27498785,27499381-27499465,27499555-27499740,
27499843-27499899,27499998-27500282
Length = 729
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 140 LATPPSARVRRIVPIVEPE-VLPDGEHDLDRAQN 238
L+TP S R++ P V P+ VLP+G D A++
Sbjct: 385 LSTPHSKRLKSCFPQVNPDIVLPNGSVSSDFAES 418
>09_05_0003 +
20016534-20016703,20017679-20017915,20018585-20018631,
20018932-20019050,20019128-20019288,20019379-20019488,
20019571-20019670,20019701-20019743,20020375-20020503
Length = 371
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = -3
Query: 127 HSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGP 17
HS WL + + N W+S P R GP
Sbjct: 213 HSSEWLTKFRATWKGMLVNHLWESNFTPQRIVRGLGP 249
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 4 GLDDLAQRCAQYKKDGCHFAKWRCVLK 84
G+DDL R + +K+G KWR L+
Sbjct: 47 GMDDLLVRLVEMEKNGHGTKKWRVKLR 73
>07_01_1073 + 9566727-9566963,9566992-9567180
Length = 141
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 109 GTMECCGRSSIRNATWQSGSR 47
GT + CG S + TW GSR
Sbjct: 78 GTSDGCGSGSGEDGTWSGGSR 98
>02_01_0756 - 5612722-5613906
Length = 394
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -1
Query: 210 PSGKTSGSTIGTIRLTLADGGVASQHIGI---LQDGLVRWSVAADLQYATP 67
PS + G T+G L AD G+A IG + D L +A ++ TP
Sbjct: 116 PSTRIVGITVGNEVLGGADAGLAEALIGAVVNIHDALKMLGLATKIELTTP 166
>02_01_0183 - 1249053-1249268
Length = 71
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 110 KPSWRMPMCWLATPPSARVRRIVPIVEPEVLPDG 211
K SW + W AT ++ P V EV+PDG
Sbjct: 6 KASWPEVVGWPATAAVTQINGDRPDVSIEVIPDG 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,320,408
Number of Sequences: 37544
Number of extensions: 242286
Number of successful extensions: 787
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -